Evidence map›Paper›PMID 35887454›Full record

ArticleJournal of fungi (Basel, Switzerland)2022

Endophytic Fungi Associated with Coffee Leaves in China Exhibited In Vitro Antagonism against Fungal and Bacterial Pathogens.

Li Lu, Samantha C Karunarathna, Kevin D Hyde, Nakarin Suwannarach, Abdallah M Elgorban, Steven L Stephenson, Salim Al-Rejaie, Ruvishika S Jayawardena, Saowaluck Tibpromma

Abstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Three new species ofMycoKeys · 2025
    Article
  7. Article
  8. Article
  9. Diversity of Leaf Fungal Endophytes from TwoPlants (Basel, Switzerland) · 2024
    Article
  10. Article
  11. Integrative Taxonomy of NovelJournal of fungi (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Li LuCenter for Yunnan Plateau Biological Resources Protection and Utilization, Yunnan Engineering Research Center of Fruit Wine, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing 655011, China.ORCID 0000-0003-0977-6414
Samantha C KarunarathnaCenter for Yunnan Plateau Biological Resources Protection and Utilization, Yunnan Engineering Research Center of Fruit Wine, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing 655011, China.ORCID 0000-0001-7080-0781
Kevin D HydeCenter of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.
Nakarin SuwannarachResearch Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand.ORCID 0000-0002-2653-1913
Abdallah M ElgorbanDepartment of Botany and Microbiology, College of Science, King Saud University, Riyadh P.O. Box 145111, Saudi Arabia.ORCID 0000-0003-3664-7853
Steven L StephensonDepartment of Biological Sciences, University of Arkansas, Fayetteville, AR 72701, USA.
Salim Al-RejaieDepartment of Pharmacology & Toxicology, College of Pharmacy, King Saud University, Riyadh P.O. Box 145111, Saudi Arabia.
Ruvishika S JayawardenaCenter of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.ORCID 0000-0001-7702-4885
Saowaluck TibprommaCenter for Yunnan Plateau Biological Resources Protection and Utilization, Yunnan Engineering Research Center of Fruit Wine, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing 655011, China.ORCID 0000-0002-4706-6547

Funding

Chiang Mai University Chiang Mai UniversityKing Saud University RSP-2021/120
6 · The paper itself

Abstract

Coffee endophytes have been studied for almost 74 years, and several studies have demonstrated coffee-endophytic fungi with antibacterial and antifungal potential for human and plant pathogens. In this study, we isolated and identified a total of 235 strains of endophytic fungi from coffee leaf tissues collected in four coffee plantations in Pu'er city, Yunnan province, China. Molecular identification was carried out using maximum likelihood phylogenetic analysis of nuclear ribosomal internal transcribed spacer (ITS1-5.8S rDNA-ITS2) sequences, while the colonization rate and the isolation frequency were also calculated. Two pathogenic fungi (

Indexed as

biocontrol agentsCoffeacoffee-endophytic fungipathogenic bacteriapathogenic fungi

Identifiers

PMID35887454
PMCPMC9317674

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.