ArticleInternational journal of molecular sciences2022
Deciphering the Genetic Basis of Root and Biomass Traits in Rapeseed (
Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 24 citations in OpenAlex.
- Dissecting genetic architecture of growth and yield traits in horsegram using GWAS.Molecular genetics and genomics : MGG · 2026Article
- Integrative GWAS and transcriptomic analyses identify candidate genes associated with oil content and fatty acid composition in safflower.BMC plant biology · 2026Article
- Morphological and Transcriptomic Analyses Provide New Insights into Linseed (Plants (Basel, Switzerland) · 2025Article
- Identification of Elite Alleles and Candidate Genes for the Cotton Boll Opening Rate via a Genome-Wide Association Study.International journal of molecular sciences · 2025Article
- Genome-wide association study identifies candidate SNP markers and genes associated with low nitrogen tolerance inFrontiers in plant science · 2025Article
- GWAS and RNA-seq reveal novel loci and genes of low-nitrogen tolerance in cucumber (Frontiers in plant science · 2025Article
- Transcriptomic profiling and discovery of key transcription factors involved in adventitious roots formation from root cuttings of mulberry.BMC genomics · 2024Article
- Research on Plant Genomics and Breeding 2.0.International journal of molecular sciences · 2024Article
- Article
- The Genetic Dissection of Nitrogen Use-Related Traits in Flax (International journal of molecular sciences · 2023Article
- Research on Plant Genomics and Breeding.International journal of molecular sciences · 2023Article
- Article
- Insights on Phytohormonal Crosstalk in Plant Response to Nitrogen Stress: A Focus on Plant Root Growth and Development.International journal of molecular sciences · 2023Review
- Transcriptome analysis reveals key regulatory genes for root growth related to potassium utilization efficiency in rapeseed (Frontiers in plant science · 2023Article
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Authors and funding
8 authors at 2 institutions in 2 countries.
Funding
Abstract
An excellent root system is responsible for crops with high nitrogen-use efficiency (NUE). The current study evaluated the natural variations in 13 root- and biomass-related traits under a low nitrogen (LN) treatment in a rapeseed association panel. The studied traits exhibited significant phenotypic differences with heritabilities ranging from 0.53 to 0.66, and most of the traits showed significant correlations with each other. The genome-wide association study (GWAS) found 51 significant and 30 suggestive trait-SNP associations that integrated into 14 valid quantitative trait loci (QTL) clusters and explained 5.7-21.2% phenotypic variance. In addition, RNA sequencing was performed at two time points to examine the differential expression of genes (DEGs) between high and low NUE lines. In total, 245, 540, and 399 DEGs were identified as LN stress-specific, high nitrogen (HN) condition-specific, and HNLN common DEGs, respectively. An integrated analysis of GWAS, weighted gene co-expression network, and DEGs revealed 16 genes involved in rapeseed root development under LN stress. Previous studies have reported that the homologs of seven out of sixteen potential genes control root growth and NUE. These findings revealed the genetic basis underlying nitrogen stress and provided worthwhile SNPs/genes information for the genetic improvement of NUE in rapeseed.
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