Evidence map›Paper›PMID 35887003›Full record

ArticleInternational journal of molecular sciences2022

In Silico Identification of lncRNAs Regulating Sperm Motility in the Turkey (

Jan Pawel Jastrzebski, Aleksandra Lipka, Marta Majewska, Karol G Makowczenko, Lukasz Paukszto, Joanna Bukowska, Slawomir Dorocki, Krzysztof Kozlowski, Mariola Slowinska

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Sperm long non-coding RNAs as markers for ram fertility.Frontiers in veterinary science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jan Pawel JastrzebskiDepartment of Plants Physiology, Genetics and Biotechnology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, 10-719 Olsztyn, Poland.ORCID 0000-0001-8699-7742
Aleksandra LipkaDepartment of Gynecology and Obstetrics, School of Medicine, Collegium Medicum, University of Warmia and Mazury in Olsztyn, 10-561 Olsztyn, Poland.ORCID 0000-0003-0815-6635
Marta MajewskaDepartment of Human Physiology and Pathophysiology, School of Medicine, Collegium Medicum, University of Warmia and Mazury in Olsztyn, 10-561 Olsztyn, Poland.ORCID 0000-0001-5856-6929
Karol G MakowczenkoDepartment of Animal Anatomy and Physiology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, 10-719 Olsztyn, Poland.ORCID 0000-0003-3758-4452
Lukasz PauksztoDepartment of Plants Physiology, Genetics and Biotechnology, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, 10-719 Olsztyn, Poland.ORCID 0000-0002-3618-1064
Joanna BukowskaIn Vitro and Cell Biotechnology Laboratory, Institute of Animal Reproduction and Food Research, Polish Academy of Sciences in Olsztyn, 10-748 Olsztyn, Poland.ORCID 0000-0001-5887-450X
Slawomir DorockiDepartment of Entrepreneurship and Spatial Management, Institute of Geography, Pedagogical University of Cracow, 30-084 Kraków, Poland.ORCID 0000-0001-6083-0346
Krzysztof KozlowskiDepartment of Poultry Science, Faculty of Animal Bioengineering, University of Warmia and Mazury in Olsztyn, Oczapowskiego 5, 10-719 Olsztyn, Poland.
Mariola SlowinskaGamete and Embryo Biology, Institute of Animal Reproduction and Food Research, Polish Academy of Sciences in Olsztyn, 10-748 Olsztyn, Poland.ORCID 0000-0002-4366-9535
University of Warmia and Mazury in Olsztyn · PLInLife Institute of Animal Reproduction and Food Research, Polish Academy of Sciences · PLUniwersytet Komisji Edukacji Narodowej w Krakowie · PL

Funding

National Science Center 2016/21/B/NZ9/03583
6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) are transcripts not translated into proteins with a length of more than 200 bp. LncRNAs are considered an important factor in the regulation of countless biological processes, mainly through the regulation of gene expression and interactions with proteins. However, the detailed mechanism of interaction as well as functions of lncRNAs are still unclear and therefore constitute a serious research challenge. In this study, for the first time, potential mechanisms of lncRNA regulation of processes related to sperm motility in turkey were investigated and described. Customized bioinformatics analysis was used to detect and identify lncRNAs, and their correlations with differentially expressed genes and proteins were also investigated. Results revealed the expression of 863 new/unknown lncRNAs in ductus deferens, testes and epididymis of turkeys. Moreover, potential relationships of the lncRNAs with the coding mRNAs and their products were identified in turkey reproductive tissues. The results obtained from the OMICS study may be useful in describing and characterizing the way that lncRNAs regulate genes and proteins as well as signaling pathways related to sperm motility.

Indexed as

RNA, Long NoncodingAnimalsGene Expression ProfilingMaleRNA, MessengerSperm MotilityTestisTurkeysRNA, Long NoncodingRNA, MessengerDELgene expressionlncRNANGSRNA-seqsperm motilitytranscriptomicsturkey

Identifiers

PMID35887003
PMCPMC9324027
OpenAlexW4285033190

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.