Evidence map›Paper›PMID 35886954›Full record

ArticleInternational journal of molecular sciences2022

Integrated mRNA and Small RNA Sequencing Reveals a microRNA Regulatory Network Associated with Starch Biosynthesis in Lotus (

Yamei Zhu, Shuping Zhao, Kangming Deng, Peng Wu, Kai Feng, Liangjun Li

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yamei ZhuSchool of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou 225000, China.
Shuping ZhaoSchool of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou 225000, China.
Kangming DengSchool of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou 225000, China.
Peng WuSchool of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou 225000, China.
Kai FengSchool of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou 225000, China.
Liangjun LiSchool of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou 225000, China.
Yangzhou University · CN

Funding

China Agriculture Research System CARS-24Jie Bang Gua Shuai JBGS[2021]017National Key R&D Program of China 2020YFD1000300
6 · The paper itself

Abstract

Internode starch biosynthesis is one of the most important traits in lotus rhizome because of its relation to crop productivity. Understanding the microRNA (miRNA) and mRNA expression profiles related to lotus internode starch biosynthesis would help develop molecular improvement strategies, but they are not yet well-investigated. To identify genes and miRNAs involved in internode starch biosynthesis, the cDNA and small RNA libraries of Z6-1, Z6-2, and Z6-3 were sequenced, and their expression were further studied. Through combined analyses of transcriptome data and small RNA sequencing data, a complex co-expression regulatory network was constructed, in which 20 miRNAs could modulate starch biosynthesis in different internodes by tuning the expression of 10 target genes. QRT-PCR analysis, transient co-expression experiment and dual luciferase assay comprehensively confirmed that

Indexed as

LotusMicroRNAsNelumboGene Expression ProfilingRhizomeRNA, MessengerSequence Analysis, RNAStarchMicroRNAsRNA, MessengerStarchmiRNANelumbo nucifera Gaertn.RNA-seqsRNA-seqstarch

Identifiers

PMID35886954
PMCPMC9318480
OpenAlexW4285004697

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.