Evidence map›Paper›PMID 35885997›Full record

ArticleGenes2022

Exploring the Mutational Landscape of Isolated Congenital Heart Defects: An Exome Sequencing Study Using Cardiac DNA.

Ilse Meerschaut, Wouter Steyaert, Thierry Bové, Katrien François, Thomas Martens, Katya De Groote, Hans De Wilde, Laura Muiño Mosquera, Joseph Panzer, Kristof Vandekerckhove and 6 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Genetic alterations in SUPT6H are associated with neurodevelopmental disorders.Biochimica et biophysica acta. Molecular basis of disease · 2026
    Article
  2. Article
  3. Article
  4. SomaticExperimental and therapeutic medicine · 2024
    Article
  5. Discovery and functional investigation ofAmerican journal of translational research · 2024
    Article
  6. Discovery ofAmerican journal of translational research · 2024
    Article
  7. Review
  8. Discovery ofBiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 3 countries.

Ilse MeerschautCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0001-5502-0568
Wouter SteyaertCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0001-8393-0788
Thierry BovéDepartment of Cardiac Surgery, Ghent University Hospital, 9000 Ghent, Belgium.
Katrien FrançoisDepartment of Cardiac Surgery, Ghent University Hospital, 9000 Ghent, Belgium.
Thomas MartensDepartment of Cardiac Surgery, Ghent University Hospital, 9000 Ghent, Belgium.
Katya De GrooteDepartment of Pediatric Cardiology, Ghent University Hospital, 9000 Ghent, Belgium.
Hans De WildeDepartment of Pediatric Cardiology, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0003-0284-6889
Laura Muiño MosqueraCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0002-3094-7807
Joseph PanzerDepartment of Pediatric Cardiology, Ghent University Hospital, 9000 Ghent, Belgium.
Kristof VandekerckhoveDepartment of Pediatric Cardiology, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0002-1481-0878
Lara MoonsCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.
Petra VermassenCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.
Sofie SymoensCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.
Paul J CouckeCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.
Daniël De WolfDepartment of Pediatric Cardiology, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0002-0846-8914
Bert CallewaertCenter for Medical Genetics, Ghent University Hospital, 9000 Ghent, Belgium.ORCID 0000-0002-9743-4205
Ghent University Hospital · BERadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Congenital heart defects (CHD) are the most common congenital anomalies in liveborn children. In contrast to syndromic CHD (SCHD), the genetic basis of isolated CHD (ICHD) is complex, and the underlying pathogenic mechanisms appear intricate and are incompletely understood. Next to rare Mendelian conditions, somatic mosaicism or a complex multifactorial genetic architecture are assumed for most ICHD. We performed exome sequencing (ES) in 73 parent-offspring ICHD trios using proband DNA extracted from cardiac tissue. We identified six germline de novo variants and 625 germline rare inherited variants with 'damaging' in silico predictions in cardiac-relevant genes expressed in the developing human heart. There were no CHD-relevant somatic variants. Transmission disequilibrium testing (TDT) and association testing (AT) yielded no statistically significant results, except for the AT of missense variants in cilia genes. Somatic mutations are not a common cause of ICHD. Rare de novo and inherited protein-damaging variants may contribute to ICHD, possibly as part of an oligogenic or polygenic disease model. TDT and AT failed to provide informative results, likely due to the lack of power, but provided a framework for future studies in larger cohorts. Overall, the diagnostic value of ES on cardiac tissue is limited in individual ICHD cases.

Indexed as

ExomeHeart Defects, CongenitalChildDNAExome SequencingHumansMutationDNAassociation testingcongenital heart defectsexome sequencingoligogenic inheritancepolygenic inheritancesomatic variationtransmission disequilibrium testing

Identifiers

PMID35885997
PMCPMC9320903
OpenAlexW4284895909

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.