Evidence map›Paper›PMID 35885564›Full record

ArticleDiagnostics (Basel, Switzerland)2022

Automated Classification of Atherosclerotic Radiomics Features in Coronary Computed Tomography Angiography (CCTA).

Mardhiyati Mohd Yunus, Ahmad Khairuddin Mohamed Yusof, Muhd Zaidi Ab Rahman, Xue Jing Koh, Akmal Sabarudin, Puteri N E Nohuddin, Kwan Hoong Ng, Mohd Mustafa Awang Kechik, Muhammad Khalis Abdul Karim

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Mardhiyati Mohd YunusProgramme of Diagnostic Imaging and Radiotherapy, Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur 56000, Malaysia.ORCID 0000-0003-3654-3333
Ahmad Khairuddin Mohamed YusofImaging Centre, Institut Jantung Negara (IJN), Kuala Lumpur 50400, Malaysia.
Muhd Zaidi Ab RahmanImaging Centre, Institut Jantung Negara (IJN), Kuala Lumpur 50400, Malaysia.
Xue Jing KohProgramme of Diagnostic Imaging and Radiotherapy, Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur 56000, Malaysia.ORCID 0000-0002-6054-6000
Akmal SabarudinProgramme of Diagnostic Imaging and Radiotherapy, Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur 56000, Malaysia.ORCID 0000-0002-4645-7917
Puteri N E NohuddinInstitute of IR4.0, Universiti Kebangsaan Malaysia (UKM), Bangi 43600, Malaysia.
Kwan Hoong NgDepartment of Biomedical Imaging, Faculty of Medicine, Universiti Malaya, Kuala Lumpur 50603, Malaysia.
Mohd Mustafa Awang KechikDepartment of Physics, Faculty of Science, Universiti Putra Malaysia (UPM), Seri Kembangan 43400, Malaysia.ORCID 0000-0002-7823-0709
Muhammad Khalis Abdul KarimDepartment of Physics, Faculty of Science, Universiti Putra Malaysia (UPM), Seri Kembangan 43400, Malaysia.ORCID 0000-0002-5357-4193
National Heart Institute · MYNational University of Malaysia · MYUniversiti Putra Malaysia · MYHigher Colleges of Technology · AEUniversity of Malaya · MYUniversity of Selangor · MY

Funding

Universiti Putra Malaysia GP-GPB/2021/9704400
6 · The paper itself

Abstract

Radiomics is the process of extracting useful quantitative features of high-dimensional data that allows for automated disease classification, including atherosclerotic disease. Hence, this study aimed to quantify and extract the radiomic features from Coronary Computed Tomography Angiography (CCTA) images and to evaluate the performance of automated machine learning (AutoML) model in classifying the atherosclerotic plaques. In total, 202 patients who underwent CCTA examination at Institut Jantung Negara (IJN) between September 2020 and May 2021 were selected as they met the inclusion criteria. Three primary coronary arteries were segmented on axial sectional images, yielding a total of 606 volume of interest (VOI). Subsequently, the first order, second order, and shape order of radiomic characteristics were extracted for each VOI. Model 1, Model 2, Model 3, and Model 4 were constructed using AutoML-based Tree-Pipeline Optimization Tools (TPOT). The heatmap confusion matrix, recall (sensitivity), precision (PPV), F1 score, accuracy, receiver operating characteristic (ROC), and area under the curve (AUC) were analysed. Notably, Model 1 with the first-order features showed superior performance in classifying the normal coronary arteries (F1 score: 0.88; Inverse F1 score: 0.94), as well as in classifying the calcified (F1 score: 0.78; Inverse F1 score: 0.91) and mixed plaques (F1 score: 0.76; Inverse F1 score: 0.86). Moreover, Model 2 consisting of second-order features was proved useful, specifically in classifying the non-calcified plaques (F1 score: 0.63; Inverse F1 score: 0.92) which are a key point for prediction of cardiac events. Nevertheless, Model 3 comprising the shape-based features did not contribute to the classification of atherosclerotic plaques. Overall, TPOT shown promising capabilities in terms of finding the best pipeline and tailoring the model using CCTA-based radiomic datasets.

Indexed as

atherosclerotic plaquesAutoMLCCTAradiomic featuressupervisedTPOT

Identifiers

PMID35885564
PMCPMC9318450
OpenAlexW4284959704

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.