Evidence map›Paper›PMID 35885431›Full record

ArticleDiagnostics (Basel, Switzerland)2022

Detection of Novel Biallelic Causative Variants in

Fozia Fozia, Rubina Nazli, May Mohammed Alrashed, Hazem K Ghneim, Zia Ul Haq, Musarrat Jabeen, Sher Alam Khan, Ijaz Ahmad, Mohammed Bourhia, Mourad A M Aboul-Soud

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Fozia FoziaInstitute of Basic Medical Sciences (IBMS), Khyber Medical University (KMU), Peshawar 25100, Khyber Pakhtunkhwa, Pakistan.
Rubina NazliInstitute of Basic Medical Sciences (IBMS), Khyber Medical University (KMU), Peshawar 25100, Khyber Pakhtunkhwa, Pakistan.
May Mohammed AlrashedChair of Medical and Molecular Genetics Research, Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Saud University, P.O. Box 10219, Riyadh 11433, Saudi Arabia.
Hazem K GhneimChair of Medical and Molecular Genetics Research, Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Saud University, P.O. Box 10219, Riyadh 11433, Saudi Arabia.
Zia Ul HaqInstitute of Public Health & Social Sciences (IPH&SS), Khyber Medical University (KMU), Peshawar 25100, Khyber Pakhtunkhwa, Pakistan.
Musarrat JabeenDepartment of Gynaecology and Obstetrics, KMU Institute of Medical Sciences, Kohat 26000, Khyber Pakhtunkhwa, Pakistan.
Sher Alam KhanDepartment of Biotechnology and Genetic Engineering, Kohat University of Science & Technology (KUST), Kohat 26000, Khyber Pakhtunkhwa, Pakistan.
Ijaz AhmadDepartment of Chemistry, Kohat University of Science & Technology (KUST), Kohat 26000, Khyber Pakhtunkhwa, Pakistan.
Mohammed BourhiaLaboratory of Chemistry, Biochemistry, Nutrition, and Environment, Faculty of Medicine and Pharmacy, University Hassan II, Casablanca 20000, Morocco.ORCID 0000-0003-3707-8461
Mourad A M Aboul-SoudChair of Medical and Molecular Genetics Research, Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, King Saud University, P.O. Box 10219, Riyadh 11433, Saudi Arabia.ORCID 0000-0001-9395-0563
Khyber Medical University · PKKing Saud University · SAKohat University of Science and Technology · PKUniversity of Hassan II Casablanca · MA

Funding

King Saud University Vice Deanship of Research Chairs --May M. Alrashed
6 · The paper itself

Abstract

Background: Dystrophic Epidermolysis bullosa (DEB) is a rare, severe subtype of epidermolysis bullosa (EB), characterized by blisters and miliary rashes of the skin. Dystrophic EB (DEB) includes variants inherited both in an autosomal-dominant or autosomal-recessive manner. Recessive dystrophic EB (RDEB) is divided into many subtypes and prevails as a result of biallelic genetic mutations in COL7A1 gene encoding type VII collagen, a major stabilizing molecule of the dermo-epidermal junction. The blister formation is mainly due to the variable structural and functional impairment of anchoring fibrils in VII collagen (COLVII), responsible for the adhesion of the epidermis to the dermis. Method: Three Pakistani families (A, B and C) affected with congenital dystrophic epidermolysis bullosa were recruited in the present study. The whole-exome sequencing (WES) approach was utilized for the detection of the pathogenic sequence variants in probands. The segregation of these variants in other participants was confirmed by Sanger sequencing. Results: This study identified a novel missense variant c.7034G>A, p. Gly2345Asp in exon 91, a novel Frameshift mutation c.385del (p. His129MetfsTer18) in a homozygous form in exon no 3, and a previously known nonsense variation (c.1573 C>T; p. Arg525Ter) in exon 12 of COL7A1 gene in families A, B, and C, respectively, as causative mutations responsible for dystrophic epidermolysis bullosa in these families. Conclusion: Our study validates the involvement of the COL7A1 gene in the etiology of dystrophic epidermolysis bullosa. It further expands the COL7A1 gene mutation database and provides an additional scientific basis for diagnosis, genetic counseling, and prognosis purposes for EB patients.

Indexed as

autosomal recessiveCOL7A1 genedystrophic epidermolysis bullosasequence variantswhole-exome sequencing

Identifiers

PMID35885431
PMCPMC9316163
OpenAlexW4283331423

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.