Evidence map›Paper›PMID 35884393›Full record

ArticleCancers2022

Identification of Endoplasmic Reticulum Stress-Related Subtypes, Infiltration Analysis of Tumor Microenvironment, and Construction of a Prognostic Model in Colorectal Cancer.

Baike Liu, Xiaonan Yin, Guangfu Jiang, Yang Li, Zhiyuan Jiang, Liming Qiang, Na Chen, Yating Fan, Chaoyong Shen, Lei Dai and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Baike LiuDepartment of Gastrointestinal Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.ORCID 0000-0002-4206-6660
Xiaonan YinDepartment of Gastrointestinal Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.
Guangfu JiangDepartment of Gastrointestinal Surgery, Guang'an People's Hospital, Guang'an 638500, China.
Yang LiDepartment of Gastrointestinal Surgery, Guang'an People's Hospital, Guang'an 638500, China.
Zhiyuan JiangDepartment of Gastrointestinal Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.ORCID 0000-0003-2483-3413
Liming QiangDepartment of Gastroenterology Ward, Guang'an People's Hospital, Guang'an 638500, China.
Na ChenState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center for Biotherapy, Chengdu 610041, China.
Yating FanState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center for Biotherapy, Chengdu 610041, China.
Chaoyong ShenDepartment of Gastrointestinal Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.
Lei DaiState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center for Biotherapy, Chengdu 610041, China.
Yuan YinDepartment of Gastrointestinal Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.
Bo ZhangDepartment of Gastrointestinal Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.
Sichuan University · CNGuang’anmen Hospital · CNChengdu Medical College · CN

Funding

Department of science and technology of Sichuan province, China 2021YFS0224Department of science and technology of Sichuan province, China 2022YFS0210Sichuan University ZYJC18034
6 · The paper itself

Abstract

Recently, endoplasmic reticulum (ER) stress has been shown to influence tumor progression and immune cell function in the tumor microenvironment (TME). However, the underlying role of ER stress-related gene patterns in colorectal cancer (CRC) development remains unclear. We analyzed the ER stress-related gene patterns in 884 patients with CRC from the Gene Expression Omnibus database and evaluated the cell-infiltrating patterns in the TME. Two ER stress-related patterns were identified in patients with CRC that had distinct cell-infiltrating patterns in the TME and clinical characteristics. A risk score and nomogram based on 14 screened prognosis-correlated genes was built and validated to predict patient survival. Patients with a higher risk score were shown to have an unfavorable prognosis, and the risk score was associated with cell infiltration and drug sensitivity. Furthermore, spatial transcriptomics data were utilized to explore ER stress-related gene patterns in CRC tissues, and it was shown that ER stress phenotype involves in the formation of the immunosuppressive TME. This study demonstrated that ER stress-related gene patterns play a role in influencing the TME and predicting prognosis. These analyses of ER stress in the TME of CRC might deepen our understanding of CRC progression and immune escape and provide novel insights into therapeutic strategies.

Indexed as

colorectal cancerER stressprognostic modelspatial transcriptomicstumor microenvironment

Identifiers

PMID35884393
PMCPMC9322646
OpenAlexW4284884859

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.