Evidence map›Paper›PMID 35883427›Full record

ArticleBiomolecules2022

Tertiary and Quaternary Structure Organization in GMP Synthetases: Implications for Catalysis.

Lionel Ballut, Sébastien Violot, Frédéric Galisson, Isabelle R Gonçalves, Juliette Martin, Santosh Shivakumaraswamy, Loïc Carrique, Hemalatha Balaram, Nushin Aghajari

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Lionel BallutMolecular Microbiology and Structural Biochemistry, UMR5086 CNRS-University of Lyon1, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.
Sébastien ViolotMolecular Microbiology and Structural Biochemistry, UMR5086 CNRS-University of Lyon1, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.
Frédéric GalissonMolecular Microbiology and Structural Biochemistry, UMR5086 CNRS-University of Lyon1, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.ORCID 0000-0001-7161-7321
Isabelle R GonçalvesMicrobiologie, Adaptation et Pathogénie, UMR5240 CNRS-University of Lyon1, F-69622 Villeurbanne, France.
Juliette MartinMolecular Microbiology and Structural Biochemistry, UMR5086 CNRS-University of Lyon1, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.ORCID 0000-0002-4787-0885
Santosh ShivakumaraswamyMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur, Bangalore 560064, India.ORCID 0000-0002-3852-3582
Loïc CarriqueMolecular Microbiology and Structural Biochemistry, UMR5086 CNRS-University of Lyon1, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.
Hemalatha BalaramMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur, Bangalore 560064, India.
Nushin AghajariMolecular Microbiology and Structural Biochemistry, UMR5086 CNRS-University of Lyon1, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.ORCID 0000-0002-2245-2679
Université Claude Bernard Lyon 1 · FRJawaharlal Nehru Centre for Advanced Scientific Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamine amidotransferases, enzymes that transfer nitrogen from Gln to various cellular metabolites, are modular, with the amidotransferase (GATase) domain hydrolyzing Gln, generating ammonia and the acceptor domain catalyzing the addition of nitrogen onto its cognate substrate. GMP synthetase (GMPS), an enzyme in the de novo purine nucleotide biosynthetic pathway, is a glutamine amidotransferase that catalyzes the synthesis of GMP from XMP. The reaction involves activation of XMP though adenylation by ATP in the ATP pyrophosphatase (ATPPase) active site, followed by channeling and attack of NH

Indexed as

AmmoniaCarbon-Nitrogen LigasesAdenosine TriphosphateCatalysisGlutamineKineticsNitrogenProtein ConformationAdenosine TriphosphateAmmoniaCarbon-Nitrogen LigasesGlutamineGMP synthase (glutamine-hydrolyzing)Nitrogenallosteric regulationammonia channelconformational changescrystal structuredimeric interfaceglutamine amidotransferaseGMP synthetasephylogenetic analysisPlasmodium falciparumsignature motifs

Identifiers

PMID35883427
PMCPMC9312489
OpenAlexW4283386652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.