Evidence map›Paper›PMID 35883288›Full record

ArticleAnimals : an open access journal from MDPI2022

Adaptability and Evolution of Gobiidae: A Genetic Exploration.

Yongquan Shang, Xibao Wang, Gang Liu, Xiaoyang Wu, Qinguo Wei, Guolei Sun, Xuesong Mei, Yuehuan Dong, Weilai Sha, Honghai Zhang

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Complete Mitochondrial Genome ofEcology and evolution · 2026
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  9. Different Evolutionary Trends of Galloanseres: Mitogenomics Analysis.Animals : an open access journal from MDPI · 2024
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  12. The complete mitochondrial genome of a Biwa goby,Mitochondrial DNA. Part B, Resources · 2024
    Article
  13. Analysis of the Complete Mitochondrial Genome ofAnimals : an open access journal from MDPI · 2023
    Article
  14. Trends of Eurasian Perch (Animals : an open access journal from MDPI · 2023
    Article
  15. Article
  16. Article
  17. Complete mitochondrial genome sequence and annotation ofMitochondrial DNA. Part B, Resources · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yongquan ShangCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Xibao WangCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.ORCID 0000-0002-2036-5184
Gang LiuCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Xiaoyang WuCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Qinguo WeiCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Guolei SunCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Xuesong MeiCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Yuehuan DongCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Weilai ShaCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Honghai ZhangCollege of Life Sciences, Qufu Normal University, Jingxuan West Street No. 57, Qufu 273165, China.
Qufu Normal University · CN

Funding

National Natural Science Foundation of China 31872242National Natural Science Foundation of China 32001228National Natural Science Foundation of China 32070405National Natural Science Foundation of China 32170530
6 · The paper itself

Abstract

The Gobiidae family occupy one of the most diverse habitat ranges of all fishes. One key reason for their successful colonization of different habitats is their ability to adapt to different energy demands. This energy requirement is related to the ability of mitochondria in cells to generate energy via oxidative phosphorylation (OXPHOS). Here, we assembled three complete mitochondrial genomes of Rhinogobius shennongensis, Rhinogobius wuyanlingensis, and Chaenogobius annularis. These mitogenomes are circular and include 13 protein-coding genes (PCGs), two rRNAs, 22 tRNAs, and one non-coding control region (CR). We used comparative mitochondrial DNA (mtDNA) genome and selection pressure analyses to explore the structure and evolutionary rates of Gobiidae mitogenomics in different environments. The CmC model showed that the ω ratios of all mtDNA PCGs were <1, and that the evolutionary rate of adenosine triphosphate 8 (atp8) was faster in Gobiidae than in other mitochondrial DNA PCGs. We also found evidence of positive selection for several sites of NADH dehydrogenase (nd) 6 and atp8 genes. Thus, divergent mechanisms appear to underlie the evolution of mtDNA PCGs, which might explain the ability of Gobiidae to adapt to diverse environments. Our study provides new insights on the adaptive evolution of Gobiidae mtDNA genome and molecular mechanisms of OXPHOS.

Indexed as

adaptationevolutionGobiidaemitogenomepositive selection

Identifiers

PMID35883288
PMCPMC9312210
OpenAlexW4284664191

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.