ArticleGenome biology and evolution2022
A Chromosome-Level Genome Assembly of Toona ciliata (Meliaceae).
Article in Genome biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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12 citing papers in PubMed, 15 citations in OpenAlex.
- Identification and Characterization of Genes Associated With Wood Property Traits via Genome Sequencing in Fast-Growing Species of GenusEvolutionary applications · 2026Article
- High-quality genome assembly of Aglaia odorata reveals evolution, terpenes diversity and abundance in Meliaceae.Molecular horticulture · 2026Article
- A new super-pangenome pipeline reveals domestication signatures of conserved noncoding sequences in the orange subfamily.Molecular biology and evolution · 2026Article
- Assessing Evolutionary Divergence in Genome-Wide MADS-Box Genes and Expression Profiles BetweenEcology and evolution · 2025Article
- Structural and phylogenetic comparisons of the complete mitochondrial genomes among taxa in genus Toona.Scientific reports · 2025Article
- Article
- Hormetic Effect Caused by Sublethal Doses of Glyphosate onPlants (Basel, Switzerland) · 2023Article
- Assessing the phylogenetic relationship among varieties ofEcology and evolution · 2023Article
- Chromosome-scale genomes of commercially important mahoganies, Swietenia macrophylla and Khaya senegalensis.Scientific data · 2023Article
- Sequencing and analysis of the complete mitochondrial genomes of Toona sinensis and Toona ciliata reveal evolutionary features of Toona.BMC genomics · 2023Article
- Phylogeography ofGenes · 2022Article
- Evolutionary Divergence betweenGenes · 2022Article
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Authors and funding
10 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Toona ciliata Roem is an important timber species in the Toona genus of the Meliaceae family and an endangered species due to over-cutting and a low rate of natural regeneration in China. Although molecular markers have been applied to studying population genetic diversity, the absence of a reliable reference genome limits in-depth genetic conservation and evolutionary studies of this species. Here, we reported a high-quality assembly of the whole genome sequence of T. ciliata. The total assembled genome has 520.64 Mb in length anchored on 28 chromosomes (contig N50 = 4.48 Mb). A total of 42,159 genes were predicted after the ab initio, homology-based, and transcriptome analyses. A total of 41,284 protein-encoding genes (97.92%) were functionally annotated and 1,246 non-coding RNAs were identified in the T. ciliata genome. Phylogenomic analysis showed that T. ciliata was divergent at 15.06 (6-25) Ma from T. sinensis of the same genus Toona. This whole genome sequence provides a valuable resource to study the genetic conservation and molecular evolution of T. ciliata in the future.
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