Evidence map›Paper›PMID 35880541›Full record

ArticleMedical physics2022

Virtual high-count PET image generation using a deep learning method.

Juan Liu, Sijin Ren, Rui Wang, Niloufarsadat Mirian, Yu-Jung Tsai, Michal Kulon, Darko Pucar, Ming-Kai Chen, Chi Liu

Abstract read
In one paragraph

Article in Medical physics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Juan LiuDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Sijin RenDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Rui WangDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Niloufarsadat MirianDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Yu-Jung TsaiDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Michal KulonDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Darko PucarDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Ming-Kai ChenDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.
Chi LiuDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, Connecticut, USA.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Quantitative Low-Dose PET ImagingR01EB025468 · NIBIB · YALE UNIVERSITY · PI CARSON, RICHARD E., LIU, CHI · 2018 to 2022
$3.2M
NCATS NIH HHS UL1 TR001863NIBIB NIH HHS R01 EB025468NIH HHS R01EB025468
6 · The paper itself

Abstract

purposeRecently, deep learning-based methods have been established to denoise the low-count positron emission tomography (PET) images and predict their standard-count image counterparts, which could achieve reduction of injected dosage and scan time, and improve image quality for equivalent lesion detectability and clinical diagnosis. In clinical settings, the majority scans are still acquired using standard injection dose with standard scan time. In this work, we applied a 3D U-Net network to reduce the noise of standard-count PET images to obtain the virtual-high-count (VHC) PET images for identifying the potential benefits of the obtained VHC PET images.

methodsThe training datasets, including down-sampled standard-count PET images as the network input and high-count images as the desired network output, were derived from 27 whole-body PET datasets, which were acquired using 90-min dynamic scan. The down-sampled standard-count PET images were rebinned with matched noise level of 195 clinical static PET datasets, by matching the normalized standard derivation (NSTD) inside 3D liver region of interests (ROIs). Cross-validation was performed on 27 PET datasets. Normalized mean square error (NMSE), peak signal to noise ratio (PSNR), structural similarity index (SSIM), and standard uptake value (SUV) bias of lesions were used for evaluation on standard-count and VHC PET images, with real-high-count PET image of 90 min as the gold standard. In addition, the network trained with 27 dynamic PET datasets was applied to 195 clinical static datasets to obtain VHC PET images. The NSTD and mean/max SUV of hypermetabolic lesions in standard-count and VHC PET images were evaluated. Three experienced nuclear medicine physicians evaluated the overall image quality of randomly selected 50 out of 195 patients' standard-count and VHC images and conducted 5-score ranking. A Wilcoxon signed-rank test was used to compare differences in the grading of standard-count and VHC images.

resultsThe cross-validation results showed that VHC PET images had improved quantitative metrics scores than the standard-count PET images. The mean/max SUVs of 35 lesions in the standard-count and true-high-count PET images did not show significantly statistical difference. Similarly, the mean/max SUVs of VHC and true-high-count PET images did not show significantly statistical difference. For the 195 clinical data, the VHC PET images had a significantly lower NSTD than the standard-count images. The mean/max SUVs of 215 hypermetabolic lesions in the VHC and standard-count images showed no statistically significant difference. In the image quality evaluation by three experienced nuclear medicine physicians, standard-count images and VHC images received scores with mean and standard deviation of 3.34±0.80 and 4.26 ± 0.72 from Physician 1, 3.02 ± 0.87 and 3.96 ± 0.73 from Physician 2, and 3.74 ± 1.10 and 4.58 ± 0.57 from Physician 3, respectively. The VHC images were consistently ranked higher than the standard-count images. The Wilcoxon signed-rank test also indicated that the image quality evaluation between standard-count and VHC images had significant difference.

conclusionsA DL method was proposed to convert the standard-count images to the VHC images. The VHC images had reduced noise level. No significant difference in mean/max SUV to the standard-count images was observed. VHC images improved image quality for better lesion detectability and clinical diagnosis.

Indexed as

Deep LearningHumansImage Processing, Computer-AssistedPositron-Emission TomographyResearch DesignSignal-To-Noise Ratiodeep learningPETvirtual high count

Identifiers

PMID35880541
PMCPMC9474624

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.