Evidence map›Paper›PMID 35880265›Full record

ArticleThe journal of physical chemistry. B2022

Dilute Bicelles for Glycosyltransferase Studies, Novel Bicelles with Phosphatidylinositol.

Joan Patrick, Mikel García Alija, Jobst Liebau, Pontus Pettersson, Ane Metola, Lena Mäler

Open access · hybridAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Joan PatrickDepartment of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.
Mikel García AlijaDepartment of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.
Jobst LiebauDepartment of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.ORCID 0000-0003-4057-6699
Pontus PetterssonDepartment of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.
Ane MetolaDepartment of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.ORCID 0000-0002-2885-7634
Lena MälerDepartment of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.ORCID 0000-0002-9464-4311
Stockholm University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Solution-state NMR can be used to study protein-lipid interactions, in particular, the effect that proteins have on lipids. One drawback is that only small assemblies can be studied, and therefore, fast-tumbling bicelles are commonly used. Bicelles contain a lipid bilayer that is solubilized by detergents. A complication is that they are only stable at high concentrations, exceeding the CMC of the detergent. This issue has previously been addressed by introducing a detergent (Cyclosfos-6) with a substantially lower CMC. Here, we developed a set of bicelles using this detergent for studies of membrane-associated mycobacterial proteins, for example, PimA, a key enzyme for bacterial growth. To mimic the lipid composition of mycobacterial membranes, PI, PG, and PC lipids were used. Diffusion NMR was used to characterize the bicelles, and spin relaxation was used to measure the dynamic properties of the lipids. The results suggest that bicelles are formed, although they are smaller than "conventional" bicelles. Moreover, we studied the effect of MTSL-labeled PimA on bicelles containing PI and PC. The paramagnetic label was shown to have a shallow location in the bicelle, affecting the glycerol backbone of the lipids. We foresee that these bicelles will be useful for detailed studies of protein-lipid interactions.

Indexed as

DetergentsPhosphatidylinositolsGlycosyltransferasesLipid BilayersMembrane ProteinsPotassium IodideDetergentsGlycosyltransferasesLipid BilayersMembrane ProteinsPhosphatidylinositolsPotassium Iodide

Identifiers

PMID35880265
PMCPMC9358657
OpenAlexW4287922205

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.