Evidence map›Paper›PMID 35880013›Full record

ArticleCell reports methods2022

Rapid 3D-STORM imaging of diverse molecular targets in tissue.

Nicholas E Albrecht, Danye Jiang, Viktor Akhanov, Robert Hobson, Colenso M Speer, Michael A Robichaux, Melanie A Samuel

Abstract read
In one paragraph

Article in Cell reports methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nicholas E AlbrechtDepartment of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA.
Danye JiangDepartment of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA.
Viktor AkhanovDepartment of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA.
Robert HobsonBruker Nano Surfaces Division, Salt Lake City, UT 84108, USA.
Colenso M SpeerDepartment of Biology, University of Maryland, College Park, MD 20742, USA.
Michael A RobichauxDepartments of Ophthalmology and Biochemistry, West Virginia University, Morgantown, WV 26506, USA.
Melanie A SamuelDepartment of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA.

Funding

VS-CoBRE Administrative CoreP20GM144230 · NIGMS · WEST VIRGINIA UNIVERSITY · PI Amanda Susanne Gatesman-Ammer · 2022 to 2026
$13.9M
Training Program in Translational Biology and Molecular MedicineT32GM088129 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ROONEY, CLIONA M., VAN DEN VEYVER, IGNATIA B · 2010 to 2019
$3.0M
Molecular Basis of Outer Retina Development and RepairR01EY030458 · NEI · BAYLOR COLLEGE OF MEDICINE · PI SAMUEL, MELANIE A · 2019 to 2023
$2.4M
Synaptic Reprogramming of Adult NeuronsDP2EY027984 · NEI · BAYLOR COLLEGE OF MEDICINE · PI SAMUEL, MELANIE A · 2016 to 2016
$2.4M
A molecular connectomics platform for multi-scale analysis of activity-dependent synapse development and plasticityDP2MH125812 · NIMH · UNIV OF MARYLAND, COLLEGE PARK · PI SPEER, COLENSO MCNAUGHTON · 2020 to 2020
$2.2M
Molecular Mechanisms of Age-related Synaptic DisorganizationR00AG044444 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SAMUEL, MELANIE A · 2015 to 2017
$740k
Role of perictyte nanotubes in age-related neurovascular dysfunctionR21AG074163 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SAMUEL, MELANIE A · 2022 to 2023
$575k
NEI NIH HHS DP2 EY027984NEI NIH HHS R01 EY030458NIA NIH HHS R00 AG044444NIA NIH HHS R21 AG074163NIGMS NIH HHS P20 GM144230NIGMS NIH HHS T32 GM088129NIMH NIH HHS DP2 MH125812
6 · The paper itself

Abstract

Fine-scale molecular architecture is critical for nervous system and other biological functions. Methods to visualize these nanoscale structures would benefit from enhanced accessibility, throughput, and tissue compatibility. Here, we report RAIN-STORM, a rapid and scalable nanoscopic imaging optimization approach that improves three-dimensional visualization for subcellular targets in tissue at depth. RAIN-STORM uses conventional tissue samples and readily available reagents and is suitable for commercial instrumentation. To illustrate the efficacy of RAIN-STORM, we utilized the retina. We show that RAIN-STORM imaging is versatile and provide 3D nanoscopic data for over 20 synapse, neuron, glia, and vasculature targets. Sample preparation is also rapid, with a 1-day turnaround from tissue to image, and parameters are suitable for multiple tissue sources. Finally, we show that this method can be applied to clinical samples to reveal nanoscale features of human cells and synapses. RAIN-STORM thus paves the way for high-throughput studies of nanoscopic targets in tissue.

Indexed as

Imaging, Three-DimensionalNeuronsHumansMicroscopy, FluorescenceNeurogliaSynapsesnanoscopic imagingneuronretinaSTORMsuper-resolutionsynapse

Identifiers

PMID35880013
PMCPMC9308169

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.