Evidence map›Paper›PMID 35879964›Full record

Article3 Biotech2022

Transcriptome analysis of floret opening and closure both Indica and Japonica rice.

Zhiqiang Yan, Ruyue Deng, Hongwei Zhang, Jiali Li, Susong Zhu

Open access · greenAbstract read
In one paragraph

Article in 3 Biotech, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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  9. Advances on the Study of Diurnal Flower-Opening Times of Rice.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zhiqiang Yan *Guizhou Academy of Agricultural Sciences, Guiyang, 550000 China.ORCID 0000-0002-4657-3125
Ruyue Deng *Guizhou Academy of Agricultural Sciences, Guiyang, 550000 China.
Hongwei ZhangGuizhou Academy of Agricultural Sciences, Guiyang, 550000 China.
Jiali LiGuizhou Academy of Agricultural Sciences, Guiyang, 550000 China.
Susong ZhuGuizhou Academy of Agricultural Sciences, Guiyang, 550000 China.
Guizhou Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Floret opening and closure are critical for rice to complete reproductive development. To further understand the molecular mechanism of floret opening and closure in rice, RNA-seq was performed on the floret of Indica and Japonica rice in the state of 1-h before floret opening, at the opening and closure, respectively. Our results show that many differentially expressed genes are produced throughout the floret opening and closure of both Indica and Japonica rice. Differentially expressed genes shared between Indica and Japonica rice at floret opening were involved in seven metabolic pathways, including plant hormone signal transduction, MAPK signaling pathway-plant, starch and sucrose metabolism, alpha-Linolenic acid metabolism, plant-pathogen interaction, diterpenoid biosynthesis, glucuronate interconversions, phenylpropanoid biosynthesis, compared to 1 h before floret opening. In addition, the expression patterns of some genes, Supplementary Information: The online version contains supplementary material available at 10.1007/s13205-022-03226-y.

Indexed as

Comparative transcriptomeFloret closureFloret openingIndica and Japonica rice

Identifiers

PMID35879964
PMCPMC9307708
OpenAlexW4286697448

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.