Evidence map›Paper›PMID 35879364›Full record

ArticleNature biotechnology2022

Ras-mutant cancers are sensitive to small molecule inhibition of V-type ATPases in mice.

Bhairavi Tolani, Anna Celli, Yanmin Yao, Yong Zi Tan, Richard Fetter, Christina R Liem, Adam J de Smith, Thamiya Vasanthakumar, Paola Bisignano, Adam D Cotton and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Nature biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

  1. Recent progress in small molecules targeting the acidic tumor microenvironment.Journal of enzyme inhibition and medicinal chemistry · 2026
    Review
  2. Compartmental pH regulation in cancer and antitumor immunity: therapeutic opportunities and challenges.Apoptosis : an international journal on programmed cell death · 2026
    Review
  3. Article
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  9. Article
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  12. V-ATPase in cancer: mechanistic insights and therapeutic potentials.Cell communication and signaling : CCS · 2024
    Review
  13. Emerging Targets in Non-Small Cell Lung Cancer.International journal of molecular sciences · 2024
    Review
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Bhairavi TolaniThoracic Oncology Program, Department of Surgery, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA, USA. Bhairavi.Tolani@ucsf.edu.ORCID http://orcid.org/0000-0001-9076-866X
Anna CelliLaboratory for Cell Analysis Core Facility, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA, USA.
Yanmin YaoDepartment of Pharmaceutical Chemistry and Cardiovascular Research Institute, University of California, San Francisco, CA, USA.
Yong Zi TanMolecular Medicine Program, The Hospital for Sick Children, Toronto, ON, Canada.ORCID http://orcid.org/0000-0001-6656-6320
Richard FetterHoward Hughes Medical Institute, Department of Biology, Stanford University, Stanford, CA, USA.
Christina R LiemDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.
Adam J de SmithCenter for Genetic Epidemiology, Department of Population and Public Health Sciences, Keck School of Medicine of University of Southern California, Los Angeles, CA, USA.
Thamiya VasanthakumarMolecular Medicine Program, The Hospital for Sick Children, Toronto, ON, Canada.
Paola BisignanoDepartment of Pharmaceutical Chemistry and Cardiovascular Research Institute, University of California, San Francisco, CA, USA.
Adam D CottonDepartment of Pharmaceutical Chemistry and Cardiovascular Research Institute, University of California, San Francisco, CA, USA.
Ian B SeipleDepartment of Pharmaceutical Chemistry and Cardiovascular Research Institute, University of California, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-8732-1362
John L RubinsteinMolecular Medicine Program, The Hospital for Sick Children, Toronto, ON, Canada.ORCID http://orcid.org/0000-0003-0566-2209
Marco JostDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA. marco_jost@hms.harvard.edu.
Jonathan S WeissmanDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-2445-670X
University of California, San Francisco · USHoward Hughes Medical Institute · USUniversity of Toronto · CAAgency for Science, Technology and Research · SGHarvard University · USUniversity of Southern California · US

Funding

Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Kate Taylor Shumate · 1999 to 2026
$209.7M
Center for Genomic Editing and Recording: Development and Application of Next-Generation Genome and Epigenome Editing Methods to Advance the Study and Treatment of Human DiseaseRM1HG009490 · NHGRI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI Brittany S. Adamson, Martin Joseph Ankrah Aryee · 2017 to 2026
$22.7M
Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VAISSE, CHRISTIAN · 2003 to 2019
$21.8M
Research Training in Chemistry and Chemical BiologyT32GM145460 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jason E Gestwicki · 2022 to 2026
$3.1M
Deciphering the logic of glycolipid signaling at the host-microbiome interfaceR00GM130964 · NIGMS · HARVARD MEDICAL SCHOOL · PI JOST, MARCO · 2021 to 2023
$747k
Deciphering the logic of glycolipid signaling at the host-microbiome interfaceK99GM130964 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOST, MARCO · 2019 to 2020
$200k
Howard Hughes Medical InstituteNCI NIH HHS P30 CA082103NHGRI NIH HHS RM1 HG009490NIDDK NIH HHS P30 DK063720NIGMS NIH HHS K99 GM130964NIGMS NIH HHS R00 GM130964NIGMS NIH HHS T32 GM145460
6 · The paper itself

Abstract

Mutations in Ras family proteins are implicated in 33% of human cancers, but direct pharmacological inhibition of Ras mutants remains challenging. As an alternative to direct inhibition, we screened for sensitivities in Ras-mutant cells and discovered 249C as a Ras-mutant selective cytotoxic agent with nanomolar potency against a spectrum of Ras-mutant cancers. 249C binds to vacuolar (V)-ATPase with nanomolar affinity and inhibits its activity, preventing lysosomal acidification and inhibiting autophagy and macropinocytosis pathways that several Ras-driven cancers rely on for survival. Unexpectedly, potency of 249C varies with the identity of the Ras driver mutation, with the highest potency for KRASG13D and G12V both in vitro and in vivo, highlighting a mutant-specific dependence on macropinocytosis and lysosomal pH. Indeed, 249C potently inhibits tumor growth without adverse side effects in mouse xenografts of KRAS-driven lung and colon cancers. A comparison of isogenic SW48 xenografts with different KRAS mutations confirmed that KRASG13D/+ (followed by G12V/+) mutations are especially sensitive to 249C treatment. These data establish proof-of-concept for targeting V-ATPase in cancers driven by specific KRAS mutations such as KRASG13D and G12V.

Indexed as

Antineoplastic AgentsNeoplasmsVacuolar Proton-Translocating ATPasesAnimalsCell Line, TumorHumansMiceMutationProto-Oncogene Proteins p21(ras)ras ProteinsAntineoplastic AgentsProto-Oncogene Proteins p21(ras)ras ProteinsVacuolar Proton-Translocating ATPases

Identifiers

PMID35879364
PMCPMC9750872
OpenAlexW4287510580

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.