Evidence map›Paper›PMID 35879301›Full record

ArticleNature communications2022

Structure and assembly of cargo Rubisco in two native α-carboxysomes.

Tao Ni, Yaqi Sun, Will Burn, Monsour M J Al-Hazeem, Yanan Zhu, Xiulian Yu, Lu-Ning Liu, Peijun Zhang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
  3. Functional and structural insights into cyanobacterial COThe Plant journal : for cell and molecular biology · 2026
    Review
  4. Architectural and biochemical advances in understanding microbial COThe Plant journal : for cell and molecular biology · 2026
    Review
  5. Article
  6. Review
  7. Structure and encapsulation of carbonic anhydrase within the α-carboxysome.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Cryo-EM single-particle analysis expanding towards increasingly native samples.Acta crystallographica. Section D, Structural biology · 2025
    Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Engineering COPlant communications · 2025
    Article
  16. Review
  17. In-cell Structure and Variability of Pyrenoid Rubisco.bioRxiv : the preprint server for biology · 2025
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Tao Ni *Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.
Yaqi Sun *Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.ORCID 0000-0002-2175-7905
Will BurnDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.ORCID 0000-0002-6502-026X
Monsour M J Al-HazeemInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Yanan ZhuDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.ORCID 0000-0003-1025-7929
Xiulian YuDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.
Lu-Ning LiuInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK. Luning.Liu@liverpool.ac.uk.ORCID 0000-0002-8884-4819
Peijun ZhangDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK. peijun.zhang@strubi.ox.ac.uk.ORCID 0000-0003-1803-691X
Centre for Human Genetics · GBUniversity of Liverpool · GB

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2007 to 2018
$48.1M
Structure and function of membrane receptor signaling complex in bacterial chemotR01GM085043 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZHANG, PEIJUN · 2009 to 2013
$1.4M
Biotechnology and Biological Sciences Research Council BB/M024202/1Biotechnology and Biological Sciences Research Council BB/S003339/1Biotechnology and Biological Sciences Research Council BB/V009729/1Department of HealthMedical Research CouncilNIGMS NIH HHS P50 GM082251NIGMS NIH HHS R01 GM085043Wellcome TrustWellcome Trust 203141/Z/16/ZWellcome Trust 206422/Z/17/Z
6 · The paper itself

Abstract

Carboxysomes are a family of bacterial microcompartments in cyanobacteria and chemoautotrophs. They encapsulate Ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) and carbonic anhydrase catalyzing carbon fixation inside a proteinaceous shell. How Rubisco complexes pack within the carboxysomes is unknown. Using cryo-electron tomography, we determine the distinct 3D organization of Rubisco inside two distant α-carboxysomes from a marine α-cyanobacterium Cyanobium sp. PCC 7001 where Rubiscos are organized in three concentric layers, and from a chemoautotrophic bacterium Halothiobacillus neapolitanus where they form intertwining spirals. We further resolve the structures of native Rubisco as well as its higher-order assembly at near-atomic resolutions by subtomogram averaging. The structures surprisingly reveal that the authentic intrinsically disordered linker protein CsoS2 interacts with Rubiscos in native carboxysomes but functions distinctively in the two α-carboxysomes. In contrast to the uniform Rubisco-CsoS2 association in the Cyanobium α-carboxysome, CsoS2 binds only to the Rubiscos close to the shell in the Halo α-carboxysome. Our findings provide critical knowledge of the assembly principles of α-carboxysomes, which may aid in the rational design and repurposing of carboxysome structures for new functions.

Indexed as

CyanobacteriaHalothiobacillusIntrinsically Disordered ProteinsBacterial ProteinsCarbon CycleCarbon DioxideOrganellesRibulose-Bisphosphate CarboxylaseBacterial ProteinsCarbon DioxideIntrinsically Disordered ProteinsRibulose-Bisphosphate Carboxylase

Identifiers

PMID35879301
PMCPMC9314367
OpenAlexW4287510390

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.