Evidence map›Paper›PMID 35877175›Full record

ArticleeLife2022

Speed variations of bacterial replisomes.

Deepak Bhat, Samuel Hauf, Charles Plessy, Yohei Yokobayashi, Simone Pigolotti

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Dynamics of chromosome organization in a minimal bacterial cell.Frontiers in cell and developmental biology · 2023
    Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Deepak BhatBiological Complexity Unit, Okinawa Institute of Science and Technology, Onna, Japan.ORCID https://orcid.org/0000-0001-9387-4951
Samuel HaufNucleic Acid Chemistry and Engineering Unit, Okinawa Institute of Science and Technology, Onna, Japan.ORCID https://orcid.org/0000-0002-3034-8441
Charles PlessyGenomics and Regulatory Systems Unit, Okinawa Institute of Science and Technology, Onna, Japan.ORCID https://orcid.org/0000-0001-7410-6295
Yohei YokobayashiNucleic Acid Chemistry and Engineering Unit, Okinawa Institute of Science and Technology, Onna, Japan.ORCID https://orcid.org/0000-0002-2417-1934
Simone PigolottiBiological Complexity Unit, Okinawa Institute of Science and Technology, Onna, Japan.ORCID https://orcid.org/0000-0002-6157-6906
Okinawa Institute of Science and Technology Graduate University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Replisomes are multi-protein complexes that replicate genomes with remarkable speed and accuracy. Despite their importance, their dynamics is poorly characterized, especially in vivo. In this paper, we present an approach to infer the replisome dynamics from the DNA abundance distribution measured in a growing bacterial population. Our method is sensitive enough to detect subtle variations of the replisome speed along the genome. As an application, we experimentally measured the DNA abundance distribution in

Indexed as

Escherichia coliEscherichia coli ProteinsChromosomesDNADNA, BacterialDNA ReplicationDNADNA, BacterialEscherichia coli ProteinsDNA replicationE. coliphysics of living systemsreplication completionreplication forks

Identifiers

PMID35877175
PMCPMC9385209
OpenAlexW4287509973

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.