Evidence map›Paper›PMID 35877068›Full record

ArticleThe Plant cell2022

A nuclear import pathway exploited by pathogenic noncoding RNAs.

Junfei Ma, Shachinthaka D Dissanayaka Mudiyanselage, Woong June Park, Mo Wang, Ryuta Takeda, Bin Liu, Ying Wang

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
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  5. Review
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  7. Article
  8. Article
  9. Review
  10. Article
  11. Beyond Loading: Functions of Plant ARGONAUTE Proteins.International journal of molecular sciences · 2023
    Review
  12. Cellular roadmaps of viroid infection.Trends in microbiology · 2023
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. CircAMOTL1 RNA and AMOTL1 Protein: Complex Functions ofInternational journal of molecular sciences · 2023
    Review
  18. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Junfei MaDepartment of Biological Sciences, Mississippi State University, Starkville, Mississippi 39762, USA.ORCID 0000-0002-3733-8983
Shachinthaka D Dissanayaka MudiyanselageDepartment of Biological Sciences, Mississippi State University, Starkville, Mississippi 39762, USA.ORCID 0000-0001-9270-8097
Woong June ParkDepartment of Molecular Biology, Dankook University, Chungnam 31116, Korea.ORCID 0000-0002-7673-8576
Mo WangFujian University Key Laboratory for Plant-Microbe Interaction, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0001-6304-392X
Ryuta TakedaLeave a Nest Co., Ltd., Tokyo 162-0822, Japan.ORCID 0000-0003-1490-1101
Bin LiuDepartment of Biological Sciences, Mississippi State University, Starkville, Mississippi 39762, USA.ORCID 0000-0003-4797-8105
Ying WangDepartment of Biological Sciences, Mississippi State University, Starkville, Mississippi 39762, USA.ORCID 0000-0002-9659-977X
Mississippi State University · USDankook University · KRFujian Agriculture and Forestry University · CN

Funding

Dissecting the regulatory role of a eukaryotic transcription factor in RNA-templated transcription catalyzed by DNA-directed RNA polymerase IIR15GM135893 · NIGMS · MISSISSIPPI STATE UNIVERSITY · PI WANG, YING · 2020 to 2020
$411k
NIGMS NIH HHS R15 GM135893
6 · The paper itself

Abstract

The prevailing view of intracellular RNA trafficking in eukaryotic cells is that RNAs transcribed in the nucleus either stay in the nucleus or cross the nuclear envelope, entering the cytoplasm for function. However, emerging evidence illustrates that numerous functional RNAs move in the reverse direction, from the cytoplasm to the nucleus. The mechanism underlying RNA nuclear import has not been well elucidated. Viroids are single-stranded circular noncoding RNAs that infect plants. Using Nicotiana benthamiana, tomato (Solanum lycopersicum), and nuclear-replicating viroids as a model, we showed that cellular IMPORTIN ALPHA-4 (IMPa-4) is likely involved in viroid RNA nuclear import, empirically supporting the involvement of Importin-based cellular pathway in RNA nuclear import. We also confirmed the involvement of a cellular protein (viroid RNA-binding protein 1 [VIRP1]) that binds both IMPa-4 and viroids. Moreover, a conserved C-loop in nuclear-replicating viroids serves as a key signal for nuclear import. Disrupting C-loop impairs VIRP1 binding, viroid nuclear accumulation, and infectivity. Further, C-loop exists in a subviral satellite noncoding RNA that relies on VIRP1 for nuclear import. These results advance our understanding of subviral RNA infection and the regulation of RNA nuclear import.

Indexed as

Solanum lycopersicumViroidsActive Transport, Cell Nucleusalpha KaryopherinsOrganophosphorus CompoundsPlant DiseasesRNARNA-Binding ProteinsRNA, UntranslatedRNA, Viralalpha Karyopherinsisopropyl methylphosphonic acidOrganophosphorus CompoundsRNARNA-Binding ProteinsRNA, UntranslatedRNA, Viral

Identifiers

PMID35877068
PMCPMC9516175
OpenAlexW4287447854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.