Evidence map›Paper›PMID 35875870›Full record

ArticleJournal of the American Chemical Society2022

Discovery of a Transferrin Receptor 1-Binding Aptamer and Its Application in Cancer Cell Depletion for Adoptive T-Cell Therapy Manufacturing.

Emmeline L Cheng, Ian I Cardle, Nataly Kacherovsky, Harsh Bansia, Tong Wang, Yunshi Zhou, Jai Raman, Albert Yen, Dominique Gutierrez, Stephen J Salipante and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Precision Aptamers Against a Native GPCR through Ligand-Guided Selection.bioRxiv : the preprint server for biology · 2026
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  13. Structure-based investigation of a DNA aptamer targeting PTK7 reveals an intricate 3D fold guiding functional optimization.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Emmeline L ChengDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.
Ian I CardleDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.ORCID 0000-0001-9000-2293
Nataly KacherovskyDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.
Harsh BansiaStructural Biology Initiative, CUNY Advanced Science Research Center, City University of New York, New York, New York 10031, United States.
Tong WangNanoscience Initiative, CUNY Advanced Science Research Center, City University of New York, New York, New York 10031, United States.ORCID 0000-0001-6615-000X
Yunshi ZhouDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.
Jai RamanDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.
Albert YenDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.
Dominique GutierrezStructural Biology Initiative, CUNY Advanced Science Research Center, City University of New York, New York, New York 10031, United States.
Stephen J SalipanteDepartment of Laboratory Medicine, University of Washington, Seattle, Washington 98195-7110, United States.
Amédée des GeorgesStructural Biology Initiative, CUNY Advanced Science Research Center, City University of New York, New York, New York 10031, United States.
Michael C JensenSeattle Children's Therapeutics, Seattle, Washington 98101, United States.
Suzie H PunDepartment of Bioengineering, University of Washington, Seattle, Washington 98195-5061, United States.ORCID 0000-0003-1443-4996
University of Washington · USThe Graduate Center, CUNY · USFred Hutch Cancer Center · US

Funding

Repurposing of cancer therapeutics for treatment of patients with COVID-19 diseaseU54CA199090 · NCI · INSTITUTE FOR SYSTEMS BIOLOGY · PI HEATH, JAMES R., RIBAS, ANTONI · 2015 to 2020
$11.4M
Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
Understanding membrane proteins’ allosteric modulation with cryo-EMR35GM133598 · NIGMS · NEW YORK UNIVERSITY · PI Amedee des Georges · 2019 to 2026
$3.4M
Designed Vehicles for Blood Brain Barrier TraversalR01AG063845 · NIA · UNIVERSITY OF WASHINGTON · PI BAKER, DAVID · 2019 to 2023
$2.5M
Leica SP8 WWL Confocal MicroscopeS10OD016240 · OD · UNIVERSITY OF WASHINGTON · PI CATTERALL, WILLIAM A · 2014 to 2014
$581k
NCI NIH HHS T32 CA080416NCI NIH HHS U54 CA199090NIA NIH HHS R01 AG063845NIGMS NIH HHS R35 GM133598NIH HHS S10 OD016240
6 · The paper itself

Abstract

The clinical manufacturing of chimeric antigen receptor (CAR) T cells includes cell selection, activation, gene transduction, and expansion. While the method of T-cell selection varies across companies, current methods do not actively eliminate the cancer cells in the patient's apheresis product from the healthy immune cells. Alarmingly, it has been found that transduction of a single leukemic B cell with the CAR gene can confer resistance to CAR T-cell therapy and lead to treatment failure. In this study, we report the identification of a novel high-affinity DNA aptamer, termed tJBA8.1, that binds transferrin receptor 1 (TfR1), a receptor broadly upregulated by cancer cells. Using competition assays, high resolution cryo-EM, and

Indexed as

NeoplasmsReceptors, Chimeric AntigenCell- and Tissue-Based TherapyHumansLeukocytes, MononuclearReceptors, Antigen, T-CellReceptors, TransferrinT-LymphocytesReceptors, Antigen, T-CellReceptors, Chimeric AntigenReceptors, Transferrin

Identifiers

PMID35875870
PMCPMC10024945
OpenAlexW4286817228

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.