Evidence map›Paper›PMID 35872970›Full record

ArticleView (Beijing, China)2022

Using All Our Genomes: Blood-based Liquid Biopsies for the Early Detection of Cancer.

Eddie Adams, Gregory D Sepich-Poore, Sandrine Miller-Montgomery, Rob Knight

Abstract read
In one paragraph

Article in View (Beijing, China), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Trial
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  4. Serum metabolic patterns reveal the diagnostic and prognostic role of alanine abnormality in ocular adnexal lymphoma.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Role of angiomotin family members in human diseases (Review).Experimental and therapeutic medicine · 2024
    Review
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  10. Article
  11. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eddie AdamsMicronoma, Inc., San Diego, CA, USA.ORCID 0000-0003-0664-6235
Gregory D Sepich-PooreMicronoma, Inc., San Diego, CA, USA.ORCID 0000-0002-3443-3715
Sandrine Miller-MontgomeryMicronoma, Inc., San Diego, CA, USA.ORCID 0000-0003-4969-9505
Rob KnightDepartment of Bioengineering, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-0975-9019

Funding

Bacterial biosensors for the prevention of gastrointestinal cancersR01CA241728 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEFF M HASTY, ROB KNIGHT · 2020 to 2026
$4.2M
Comprehensive characterization of the cancer microbiome and its immuno-oncology interfaceF30CA243480 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI POORE, GREGORY DERRICK · 2020 to 2021
$73k
NCI NIH HHS F30 CA243480NCI NIH HHS R01 CA241728
6 · The paper itself

Abstract

The pursuit of highly sensitive and specific cancer diagnostics based on cell-free (cf) nucleic acids isolated from minimally invasive liquid biopsies has been an area of intense research and commercial effort for at least two decades. Most of these tests detect cancer-specific mutations or epigenetic modifications on circulating DNA derived from tumor cells (ctDNA). Although recent FDA approvals of both single and multi-analyte liquid biopsy companion diagnostic assays are proof of the tremendous progress made in this domain, using ctDNA for the diagnosis of early-stage (stage I/II) cancers remains challenging due to several factors, such as low mutational allele frequency in circulation, overlapping profiles in genomic alterations among diverse cancers, and clonal hematopoiesis. This review discusses these analytical challenges, interim solutions, and the opportunity to complement ctDNA diagnostics with microbiome-aware analyses that may mitigate several existing ctDNA assay limitations.

Indexed as

cancer detectioncancer screeningcell-free DNAcirculating tumor DNAearly detectionmicrobiome

Identifiers

PMID35872970
PMCPMC9307139

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.