Evidence map›Paper›PMID 35872944›Full record

ArticleComputational and mathematical methods in medicine2022

Hub Gene Screening Associated with Early Glaucoma: An Integrated Bioinformatics Analysis.

Rui Tian, Fuqiang Li, Songtian Che, Meijiao Song, Lu Liu, Rong Guo, Zhuoya Li, Xiaomin Hu, Hui Zhang

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Rui TianDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Fuqiang LiDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Songtian CheDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Meijiao SongDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Lu LiuDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Rong GuoDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Zhuoya LiDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Xiaomin HuDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.
Hui ZhangDepartment of Ophthalmology, The Second Hospital of Jilin University, Changchun, 130041 Jilin Province, China.ORCID https://orcid.org/0000-0002-4081-2834
Second Affiliated Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Primary open-angle glaucoma (POAG) is the most common type of glaucoma. The potential influence of some DEGs on the progression of POAG was still incomplete. In this study, we integrated transcriptome data with clinical data to investigate the relationship between them in POAG patients. Methods: The gene expression profile (GSE27276) from Gene Expression Omnibus (GEO) was used to identify DEGs. The LIMMA package of R was used to identify the DEGs (Diboun et al., 2006). The adjusted Results: A total of 182 DEGs were identified through our analysis, of which 119 genes were upregulated and 63 genes were downregulated. GO enrichment analysis illustrated that these DEGs were mostly enriched into haptoglobin binding, antioxidant activity, and organic acid binding. KEGG enrichment analysis illustrated that these DEGs were mostly enriched into Conclusion: Our results demonstrate the potential influence of some DEGs on the progression of POAG, providing a comprehensive bioinformatics analysis of the pathogenesis, which may contribute to future investigation into the molecular mechanisms and biomarkers.

Indexed as

Computational BiologyGlaucoma, Open-AngleDatabases, GeneticGene Expression ProfilingGene OntologyGene Regulatory NetworksHumansProtein Interaction MappingProtein Interaction MapsTranscriptome

Identifiers

PMID35872944
PMCPMC9307363
OpenAlexW4285590510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.