Evidence map›Paper›PMID 35871668›Full record

ArticlePlanta2022

A novel aldo-keto reductase gene is involved in 6'-deoxychalcone biosynthesis in dahlia (Dahlia variabilis).

Sho Ohno, Haruka Yamada, Kei Maruyama, Ayumi Deguchi, Yasunari Kato, Mizuki Yokota, Fumi Tatsuzawa, Munetaka Hosokawa, Motoaki Doi

Abstract read
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In one paragraph

Article in Planta, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sho OhnoGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan. ohno.sho.3c@kyoto-u.ac.jp.ORCID http://orcid.org/0000-0002-0810-0327
Haruka YamadaGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Kei MaruyamaGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Ayumi DeguchiGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Yasunari KatoGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Mizuki YokotaGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Fumi TatsuzawaFaculty of Agriculture, Iwate University, Iwate, Morioka, 020-8550, Japan.
Munetaka HosokawaGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Motoaki DoiGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Kyoto University · JPChiba University · JPIwate University · JP

Funding

Japan Society for the Promotion of Science 18K14455
6 · The paper itself

Abstract

MAIN

conclusionA novel gene belonging to the aldo-keto reductase 13 family is involved in isoliquiritigenin biosynthesis in dahlia. The yellow pigments of dahlia flowers are derived from 6'-deoxychalcones, which are synthesized via a two-step process, involving the conversion of 3-malonyl-CoA and 4-coumaloyl-CoA into isoliquiritigenin in the first step, and the subsequent generation of butein from isoliquiritigenin. The first step reaction is catalyzed by chalcone synthase (CHS) and aldo-keto reductase (AKR). AKR has been implicated in the isoflavone biosynthesis in legumes, however, isolation of butein biosynthesis related AKR members are yet to be reported. A comparative RNA-seq analysis between two dahlia cultivars, 'Shukuhai' and its butein-deficient lateral mutant 'Rinka', was used in this study to identify a novel AKR gene involved in 6'-deoxychalcone biosynthesis. DvAKR1 encoded a AKR 13 sub-family protein with significant differential expression levels, and was phylogenetically distinct from the chalcone reductases, which belongs to the AKR 4A sub-family in legumes. DNA sequence variation and expression profiles of DvAKR1 gene were correlated with 6'-deoxychalcone accumulation in the tested dahlia cultivars. A single over-expression analysis of DvAKR1 was not sufficient to initiate the accumulation of isoliquiritigenin in tobacco, in contrast, its co-overexpression with a chalcone 4'-O-glucosyltransferase (Am4'CGT) from Antirrhinum majus and a MYB transcription factor, CaMYBA from Capsicum annuum successfully induced isoliquiritigenin accumulation. In addition, DvAKR1 homologous gene expression was detected in Coreopsideae species accumulating 6'-deoxychalcone, but not in Asteraceae species lacking 6'-deoxychalcone production. These results not only demonstrate the involvement of DvAKR1 in the biosynthesis of 6'-deoxychalcone in dahlia, but also show that 6'-deoxychalcone occurrence in Coreopsideae species developed evolutionarily independent from legume species.

Indexed as

ChalconesDahliaAldehyde ReductaseAldo-Keto ReductasesCoenzyme AAldehyde ReductaseAldo-Keto ReductasesChalconesCoenzyme AisoliquiritigeninAKRButeinChalcone reductaseFlavonoidsIsoliquiritigeninYellow pigment

Identifiers

PMID35871668
OpenAlexW4286817180

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.