Evidence map›Paper›PMID 35871304›Full record

ArticleNucleic acids research2022

mRNA- and factor-driven dynamic variability controls eIF4F-cap recognition for translation initiation.

Burak Çetin, Seán E O'Leary

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Remodeling of mRNA by eIF4F in human translation initiation.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Article
  4. Saga of MCL1 inhibitors in multiple myeloma.Biochemical pharmacology · 2026
    Review
  5. Article
  6. Dynamics and Regulation of mRNA Cap Recognition by Human eIF4F.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. The mechanism of mRNA activation.bioRxiv : the preprint server for biology · 2023
    Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Burak ÇetinGraduate Program in Cell, Molecular, and Developmental Biology, University of California Riverside, Riverside, CA 92521, USA.
Seán E O'LearyGraduate Program in Cell, Molecular, and Developmental Biology, University of California Riverside, Riverside, CA 92521, USA.ORCID 0000-0002-1214-949X
University of California, Riverside · US

Funding

Dynamics of Eukaryotic Ribosomal ScanningR01GM138939 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Sean E O'Leary · 2020 to 2026
$2.0M
Dynamics of Eukaryotic Translation InitiationR00GM111858 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI O'LEARY, SEAN E · 2016 to 2018
$720k
Transcriptome-wide, single-molecule dynamics of RNA-protein interaction.R21GM139056 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI O'LEARY, SEAN E · 2020 to 2021
$409k
NIGMS NIH HHS R00 GM111858NIGMS NIH HHS R01 GM138939NIGMS NIH HHS R21 GM139056
6 · The paper itself

Abstract

mRNA 5' cap recognition by eIF4F is a key element of eukaryotic translational control. Kinetic differences in eIF4F-mRNA interactions have long been proposed to mediate translation-efficiency differences between mRNAs, and recent transcriptome-wide studies have revealed significant heterogeneity in eIF4F engagement with differentially-translated mRNAs. However, detailed kinetic information exists only for eIF4F interactions with short model RNAs. We developed and applied single-molecule fluorescence approaches to directly observe real-time Saccharomyces cerevisiae eIF4F subunit interactions with full-length polyadenylated mRNAs. We found that eIF4E-mRNA association rates linearly anticorrelate with mRNA length. eIF4G-mRNA interaction accelerates eIF4E-mRNA association in proportion to mRNA length, as does an eIF4F-independent activity of eIF4A, though cap-proximal secondary structure still plays an important role in defining the final association rates. eIF4F-mRNA interactions remained dominated by effects of eIF4G, but were modulated to different extents for different mRNAs by the presence of eIF4A and ATP. We also found that eIF4A-catalyzed ATP hydrolysis ejects eIF4E, and likely eIF4E•eIF4G from the mRNA after initial eIF4F•mRNA complex formation, suggesting a mechanism to prepare the mRNA 5' end for ribosome recruitment. Our results support a role for mRNA-specific, factor-driven eIF4F association rates in kinetically controlling translation.

Indexed as

Adenosine TriphosphateEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4FEukaryotic Initiation Factor-4GProtein BiosynthesisRNA HelicasesRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphateEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4FEukaryotic Initiation Factor-4GRNA HelicasesRNA, MessengerSaccharomyces cerevisiae ProteinsTIF1 protein, S cerevisiaeTIF2 protein, S cerevisiae

Identifiers

PMID35871304
PMCPMC9371892
OpenAlexW4286797659

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.