Evidence map›Paper›PMID 35871253›Full record

ArticleScientific reports2022

Loop-mediated isothermal amplification (LAMP) assays for detection of the New Guinea fruit fly Bactrocera trivialis (Drew) (Diptera: Tephritidae).

Melissa L Starkie, Elizabeth V Fowler, Xiaocheng Zhu, Arati Agarwal, Lea Rako, Isarena C Schneider, Mark K Schutze, Jane E Royer, David Gopurenko, Peter Gillespie and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Melissa L StarkieDepartment of Agriculture and Fisheries, Biosecurity Queensland, Brisbane, QLD, Australia. melissa.starkie@daf.qld.gov.au.
Elizabeth V FowlerDepartment of Agriculture and Fisheries, Biosecurity Queensland, Brisbane, QLD, Australia.
Xiaocheng ZhuNew South Wales Department of Primary Industries, Orange, NSW, Australia.
Arati AgarwalDepartment of Jobs, Precincts and Regions, Agriculture Victoria, Bundoora, VIC, Australia.
Lea RakoDepartment of Jobs, Precincts and Regions, Agriculture Victoria, Bundoora, VIC, Australia.
Isarena C SchneiderDepartment of Agriculture, Water and the Environment, Cairns, QLD, Australia.
Mark K SchutzeDepartment of Agriculture and Fisheries, Biosecurity Queensland, Brisbane, QLD, Australia.
Jane E RoyerDepartment of Agriculture and Fisheries, Biosecurity Queensland, Brisbane, QLD, Australia.
David GopurenkoNew South Wales Department of Primary Industries, Orange, NSW, Australia.
Peter GillespieNew South Wales Department of Primary Industries, Orange, NSW, Australia.
Mark J BlacketDepartment of Jobs, Precincts and Regions, Agriculture Victoria, Bundoora, VIC, Australia.
Queensland Department of Agriculture and Fisheries · AUAgriculture Victoria · AUNew South Wales Department of Primary Industries · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cue-lure-responding New Guinea fruit fly, Bactrocera trivialis, poses a biosecurity risk to neighbouring countries, e.g., Australia. In trapping programs, lure caught flies are usually morphologically discriminated from non-target species; however, DNA barcoding can be used to confirm similar species where morphology is inconclusive, e.g., Bactrocera breviaculeus and B. rufofuscula. This can take days-and a laboratory-to resolve. A quicker, simpler, molecular diagnostic assay would facilitate a more rapid detection and potential incursion response. We developed LAMP assays targeting cytochrome c oxidase subunit I (COI) and Eukaryotic Translation Initiation Factor 3 Subunit L (EIF3L); both assays detected B. trivialis within 25 min. The BtrivCOI and BtrivEIF3L assay anneal derivatives were 82.7 ± 0.8 °C and 83.3 ± 1.3 °C, respectively, detecting down to 1 × 10

Indexed as

TephritidaeAnimalsAustraliaDrosophilaMolecular Diagnostic TechniquesNew GuineaNucleic Acid Amplification Techniques

Identifiers

PMID35871253
PMCPMC9308764
OpenAlexW4286715929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.