Evidence map›Paper›PMID 35871249›Full record

ArticleNature communications2022

Rep15 interacts with several Rab GTPases and has a distinct fold for a Rab effector.

Amrita Rai, Anurag K Singh, Nathalie Bleimling, Guido Posern, Ingrid R Vetter, Roger S Goody

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Amrita RaiDepartment of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany. amrita.rai@mpi-dortmund.mpg.de.ORCID 0000-0002-5471-5250
Anurag K SinghInstitute for Physiological Chemistry, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.ORCID 0000-0003-0818-0993
Nathalie BleimlingDepartment of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany.
Guido PosernInstitute for Physiological Chemistry, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Ingrid R VetterDepartment of Mechanistic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany.
Roger S GoodyDepartment of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany. goody@mpi-dortmund.mpg.de.ORCID 0000-0002-0772-0444
Max Planck Institute of Molecular Physiology · DEMartin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In their GTP-bound (active) form, Rab proteins interact with effector proteins that control downstream signaling. One such Rab15 effector is Rep15, which is known to have a role in receptor recycling from the endocytic recycling compartment but otherwise remains poorly characterized. Here, we report the characterization of the Rep15:Rab15 interaction and identification of Rab3 paralogs and Rab34 as Rep15 interacting partners from a yeast two-hybrid assay. Biochemical validation of the interactions is presented and crystal structures of the Rep15:Rab3B and Rep15:Rab3C complexes provide additional mechanistic insight. We find that Rep15 adopts a globular structure that is distinct from other reported Rab15, Rab3 and Rab34 effectors. Structure-based mutagenesis experiments explain the Rep15:Rab interaction specificity. Rep15 depletion in U138MG glioblastoma cells impairs cell proliferation, cell migration and receptor recycling, underscoring the need for further clarification of the role of Rep15 in cancer.

Indexed as

rab GTP-Binding ProteinsProtein BindingTwo-Hybrid System Techniquesrab GTP-Binding Proteins

Identifiers

PMID35871249
PMCPMC9308819
OpenAlexW4286741931

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.