Evidence map›Paper›PMID 35869307›Full record

ArticleAbdominal radiology (New York)2022

An MRI-based radiomics model to predict clear cell renal cell carcinoma growth rate classes in patients with von Hippel-Lindau syndrome.

Pouria Yazdian Anari, Nathan Lay, Nikhil Gopal, Aditi Chaurasia, Safa Samimi, Stephanie Harmon, Fatemeh Dehghani Firouzabadi, Maria J Merino, Paul Wakim, Evrim Turkbey and 5 more

Open access · greenAbstract read
In one paragraph

Article in Abdominal radiology (New York), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Pouria Yazdian AnariRadiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.
Nathan LayArtificial Intelligence Resource, Clinical Center, National Institutes of Health, Bethesda, MD, USA.
Nikhil GopalUrologic Oncology Branch, Clinical Center, National Cancer Institute (NCI), National Institutes of Health, Bethesda, MD, USA.
Aditi ChaurasiaRadiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.
Safa SamimiRadiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.
Stephanie HarmonArtificial Intelligence Resource, Clinical Center, National Institutes of Health, Bethesda, MD, USA.
Fatemeh Dehghani FirouzabadiRadiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.
Maria J MerinoPathology Department, Clinical Center, National Cancer Institutes (NCI), National Institutes of Health, Bethesda, MD, USA.
Paul WakimBiostatistics and Clinical Epidemiology Service, Clinical Center, National Institutes of Health, Bethesda, MD, USA.
Evrim TurkbeyRadiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.
Elizabeth C JonesRadiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.
Mark W BallUrologic Oncology Branch, Clinical Center, National Cancer Institute (NCI), National Institutes of Health, Bethesda, MD, USA.
Baris TurkbeyArtificial Intelligence Resource, Clinical Center, National Institutes of Health, Bethesda, MD, USA.
W Marston Linehan *Urologic Oncology Branch, Clinical Center, National Cancer Institute (NCI), National Institutes of Health, Bldg. 10, Room 2 W-5940 and Room 1-5940, 10 Center Drive, Bethesda, MD, 20892, USA. linehanm@mail.nih.gov.
Ashkan A Malayeri *Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, 10 Center Drive, Bethesda, MD, 20892-1109, USA. ashkan.malayeri@nih.gov.ORCID 0000-0002-4442-7343
National Institutes of Health Clinical Center · USNational Institutes of Health · USNational Cancer Institute · US

Funding

Urologic Oncology Branch Consult CoreZIDBC011092 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$41.0M
Molecular Therapeutics of Kidney Cancer: VHL Gene and Fumarate Hydratase GeneZIABC011038 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$29.8M
Clinical Nursing and Data Management CoreZIDBC011089 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$17.4M
CCR Artificial Intelligence ResourceZIHBC012032 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TÜRKBEY, BARIS · 2021 to 2025
$10.1M
Study of Hereditary Renal and Other Familial SyndromesZIABC010696 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MERINO, MARIA · 2009 to 2025
$4.5M
Imaging, image guided biopsy and treatment of prostate cancerZIABC012062 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TÜRKBEY, BARIS · 2021 to 2025
$1.3M
Intramural NIH HHS ZIA BC011038Intramural NIH HHS ZIH BC012032
6 · The paper itself

Abstract

purposeUpfront knowledge of tumor growth rates of clear cell renal cell carcinoma in von Hippel-Lindau syndrome (VHL) patients can allow for a more personalized approach to either surveillance imaging frequency or surgical planning. In this study, we implement a machine learning algorithm utilizing radiomic features of renal tumors identified on baseline magnetic resonance imaging (MRI) in VHL patients to predict the volumetric growth rate category of these tumors. MATERIALS AND

methodsA total of 73 VHL patients with 173 pathologically confirmed Clear Cell Renal Cell Carcinoma (ccRCCs) underwent MRI at least at two different time points between 2015 and 2021. Each tumor was manually segmented in excretory phase contrast T1 weighed MRI and co-registered on pre-contrast, corticomedullary and nephrographic phases. Radiomic features and volumetric data from each tumor were extracted using the PyRadiomics library in Python (4544 total features). Tumor doubling time (DT) was calculated and patients were divided into two groups: DT <  = 1 year and DT > 1 year. Random forest classifier (RFC) was used to predict the DT category. To measure prediction performance, the cohort was randomly divided into 100 training and test sets (80% and 20%). Model performance was evaluated using area under curve of receiver operating characteristic curve (AUC-ROC), as well as accuracy, F1, precision and recall, reported as percentages with 95% confidence intervals (CIs).

resultsThe average age of patients was 47.2 ± 10.3 years. Mean interval between MRIs for each patient was 1.3 years. Tumors included in this study were categorized into 155 Grade 2; 16 Grade 3; and 2 Grade 4. Mean accuracy of RFC model was 79.0% [67.4-90.6] and mean AUC-ROC of 0.795 [0.608-0.988]. The accuracy for predicting DT classes was not different among the MRI sequences (P-value = 0.56).

conclusionHere we demonstrate the utility of machine learning in accurately predicting the renal tumor growth rate category of VHL patients based on radiomic features extracted from different T1-weighted pre- and post-contrast MRI sequences.

Indexed as

Carcinoma, Renal CellKidney Neoplasmsvon Hippel-Lindau DiseaseAdultHumansMachine LearningMagnetic Resonance ImagingMiddle AgedRetrospective StudiesClear cell renal cell carcinomaRadiomicsvon Hippel-Lindau syndrome

Identifiers

PMID35869307
PMCPMC10645140
OpenAlexW4286716503

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.