Evidence map›Paper›PMID 35869252›Full record

ArticleScientific reports2022

Non-random genetic alterations in the cyanobacterium Nostoc sp. exposed to space conditions.

Yuguang Liu, Patricio Jeraldo, William Herbert, Samantha McDonough, Bruce Eckloff, Jean-Pierre de Vera, Charles Cockell, Thomas Leya, Mickael Baqué, Jin Jen and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yuguang Liu *Division of Surgical Research, Department of Surgery, Mayo Clinic, Rochester, MN, 55905, USA.
Patricio Jeraldo *Division of Surgical Research, Department of Surgery, Mayo Clinic, Rochester, MN, 55905, USA.
William HerbertMicrobiome Program, Center for Individulized Medicine, Mayo Clinic, Rochester, MN, 55905, USA.
Samantha McDonoughMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Bruce EckloffMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Jean-Pierre de VeraSpace Operations and Astronaut Training, Microgravity User Support Center (MUSC), German Aerospace Center (DLR), Linder Höhe, 51147, Köln, Germany.
Charles CockellSchool of Physics and Astronomy, University of Edinburgh, Edinburgh, EH9 3FD, UK.
Thomas LeyaFraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses IZI-BB, 14476, Potsdam, Germany.
Mickael BaquéAstrobiological Laboratories, Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), 12489, Berlin, Germany.
Jin JenMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Dirk Schulze-MakuchAstrobiology Group, Center of Astronomy and Astrophysics, Technische Universität Berlin, 10623, Berlin, Germany. schulze-makuch@tu-berlin.de.
Marina Walther-AntonioDivision of Surgical Research, Department of Surgery, Mayo Clinic, Rochester, MN, 55905, USA. waltherantonio.marina@mayo.edu.

Funding

Institutional Career Development CoreKL2TR002379 · NCATS · MAYO CLINIC ROCHESTER · PI NILUFER ERTEKIN-TANER · 2017 to 2026
$14.9M
European Research Council 339231NCATS NIH HHS KL2TR002379
6 · The paper itself

Abstract

Understanding the impact of long-term exposure of microorganisms to space is critical in understanding how these exposures impact the evolution and adaptation of microbial life under space conditions. In this work we subjected Nostoc sp. CCCryo 231-06, a cyanobacterium capable of living under many different ecological conditions, and also surviving in extreme ones, to a 23-month stay at the International Space Station (the Biology and Mars Experiment, BIOMEX, on the EXPOSE-R2 platform) and returned it to Earth for single-cell genome analysis. We used microfluidic technology and single cell sequencing to identify the changes that occurred in the whole genome of single Nostoc cells. The variant profile showed that biofilm and photosystem associated loci were the most altered, with an increased variant rate of synonymous base pair substitutions. The cause(s) of these non-random alterations and their implications to the evolutionary potential of single bacterial cells under long-term cosmic exposure warrants further investigation.

Indexed as

ExobiologyNostocEarth, PlanetExtraterrestrial EnvironmentUltraviolet Rays

Identifiers

PMID35869252
PMCPMC9307615

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.