Evidence map›Paper›PMID 35867729›Full record

ArticlePloS one2022

PROM1, CXCL8, RUNX1, NAV1 and TP73 genes as independent markers predictive of prognosis or response to treatment in two cohorts of high-grade serous ovarian cancer patients.

Agnieszka Dansonka-Mieszkowska, Laura Aleksandra Szafron, Magdalena Kulesza, Anna Stachurska, Pawel Leszczynski, Agnieszka Tomczyk-Szatkowska, Piotr Sobiczewski, Joanna Parada, Mariusz Kulinczak, Joanna Moes-Sosnowska and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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  4. A Multi-Faceted Analysis ShowingInternational journal of molecular sciences · 2024
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  5. Review
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  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Agnieszka Dansonka-MieszkowskaLaboratory of Genetic and Molecular Cancer Diagnostics, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Laura Aleksandra SzafronDepartment of Cancer Biology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Magdalena KuleszaLaboratory of Genetic and Molecular Cancer Diagnostics, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Anna StachurskaLaboratory of Genetic and Molecular Cancer Diagnostics, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Pawel LeszczynskiLaboratory of Genetic and Molecular Cancer Diagnostics, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Agnieszka Tomczyk-SzatkowskaDepartment of Cancer Pathomorphology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Piotr SobiczewskiDepartment of Gynecological Oncology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Joanna ParadaDepartment of Cancer Biology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Mariusz KulinczakDepartment of Cancer Biology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Joanna Moes-SosnowskaDepartment of Cancer Biology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Barbara Pienkowska-GrelaCytogenetics Laboratory, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Jolanta KupryjanczykDepartment of Cancer Pathomorphology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.
Magdalena ChechlinskaDepartment of Cancer Biology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.ORCID 0000-0001-6139-1234
Lukasz Michal SzafronDepartment of Cancer Biology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.ORCID 0000-0003-1670-0274
The Maria Sklodowska-Curie National Research Institute of Oncology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Considering the vast biological diversity and high mortality rate in high-grade ovarian cancers, identification of novel biomarkers, enabling precise diagnosis and effective, less aggravating treatment, is of paramount importance. Based on scientific literature data, we selected 80 cancer-related genes and evaluated their mRNA expression in 70 high-grade serous ovarian cancer (HGSOC) samples by Real-Time qPCR. The results were validated in an independent Northern American cohort of 85 HGSOC patients with publicly available NGS RNA-seq data. Detailed statistical analyses of our cohort with multivariate Cox and logistic regression models considering clinico-pathological data and different TP53 mutation statuses, revealed an altered expression of 49 genes to affect the prognosis and/or treatment response. Next, these genes were investigated in the validation cohort, to confirm the clinical significance of their expression alterations, and to identify genetic variants with an expected high or moderate impact on their products. The expression changes of five genes, PROM1, CXCL8, RUNX1, NAV1, TP73, were found to predict prognosis or response to treatment in both cohorts, depending on the TP53 mutation status. In addition, we revealed novel and confirmed known SNPs in these genes, and showed that SNPs in the PROM1 gene correlated with its elevated expression.

Indexed as

Cystadenocarcinoma, SerousOvarian NeoplasmsAC133 AntigenBiomarkersCore Binding Factor Alpha 2 SubunitFemaleHumansPrognosisAC133 AntigenBiomarkersCore Binding Factor Alpha 2 SubunitPROM1 protein, humanRUNX1 protein, human

Identifiers

PMID35867729
PMCPMC9307210
OpenAlexW4286587320

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.