Evidence map›Paper›PMID 35866309›Full record

ArticleAngewandte Chemie (International ed. in English)2022

Phase Separation of Heterogeneous Nuclear Ribonucleoprotein A1 upon Specific RNA-Binding Observed by Magnetic Resonance.

Irina Ritsch, Elisabeth Lehmann, Leonidas Emmanouilidis, Maxim Yulikov, Frédéric Allain, Gunnar Jeschke

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 51 citations in OpenAlex.

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  17. Protein ensemble modeling and analysis with MMMx.Protein science : a publication of the Protein Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Irina RitschLaboratory of Physical Chemistry, Department of Chemistry and Applied Bioscience, ETH Zurich, Vladimir-Prelog-Weg 2, 8093, Zürich, Switzerland.ORCID 0000-0001-9889-8397
Elisabeth LehmannInstitute of Biochemistry, Department of Biology, ETH Zurich, Hönggerbergring 64, 8093, Zürich, Switzerland.
Leonidas EmmanouilidisInstitute of Biochemistry, Department of Biology, ETH Zurich, Hönggerbergring 64, 8093, Zürich, Switzerland.ORCID 0000-0001-8931-8901
Maxim YulikovLaboratory of Physical Chemistry, Department of Chemistry and Applied Bioscience, ETH Zurich, Vladimir-Prelog-Weg 2, 8093, Zürich, Switzerland.ORCID 0000-0003-3275-0714
Frédéric AllainInstitute of Biochemistry, Department of Biology, ETH Zurich, Hönggerbergring 64, 8093, Zürich, Switzerland.
Gunnar JeschkeLaboratory of Physical Chemistry, Department of Chemistry and Applied Bioscience, ETH Zurich, Vladimir-Prelog-Weg 2, 8093, Zürich, Switzerland.ORCID 0000-0001-6853-8585
ETH Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interaction of heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) with specific single-stranded RNA and its relation to liquid-liquid phase separation (LLPS) were studied in vitro by magnetic resonance based on site-directed spin labelling. An ensemble model of dispersed hnRNP A1 in the absence of RNA was derived from distance distributions between spin labelled sites and small angle X-ray scattering. This model revealed a compact state of the low-complexity domain and its interaction with the RNA recognition motifs. Paramagnetic relaxation enhancement NMR spectroscopy confirmed this interaction. Addition of RNA to dispersed hnRNP A1 induced liquid-droplet formation. Such LLPS depended on RNA concentration and sequence, with continuous wave EPR spectroscopy showing an influence of RNA point mutations on local protein dynamics. We propose that an interplay of sequence-specific RNA binding and LLPS contributes to regulation of specific RNA segregation during stress response.

Indexed as

Heterogeneous-Nuclear Ribonucleoprotein Group A-BBinding SitesHeterogeneous Nuclear Ribonucleoprotein A1Magnetic Resonance SpectroscopyRNAHeterogeneous Nuclear Ribonucleoprotein A1Heterogeneous-Nuclear Ribonucleoprotein Group A-BRNAbiophysicsEPR spectroscopyintrinsically disordered domainNMR spectroscopyRNA

Identifiers

PMID35866309
PMCPMC9804974
OpenAlexW4286457213

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.