Evidence map›Paper›PMID 35864155›Full record

ArticleCommunications biology2022

A complete nicotinate degradation pathway in the microbial eukaryote Aspergillus nidulans.

Eszter Bokor, Judit Ámon, Mónika Varga, András Szekeres, Zsófia Hegedűs, Tamás Jakusch, Zsolt Szakonyi, Michel Flipphi, Csaba Vágvölgyi, Attila Gácser and 2 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. A vitamin BScience advances · 2026
    Article
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  3. Article
  4. Article
  5. Article
  6. Synthesis and crystallographic characterization of 6-hydroxy-1,2-dihydropyridin-2-one.Acta crystallographica. Section E, Crystallographic communications · 2023
    Article
  7. Regulation of nutrient utilization in filamentous fungi.Applied microbiology and biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Eszter BokorUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.ORCID 0000-0003-2338-859X
Judit ÁmonUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.
Mónika VargaUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.
András SzekeresUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.
Zsófia HegedűsUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.ORCID 0000-0003-2900-2010
Tamás JakuschUniversity of Szeged Faculty of Science and Informatics, Department of Inorganic and Analytical Chemistry, Szeged, Hungary.
Zsolt SzakonyiUniversity of Szeged Faculty of Pharmacy, Institute of Pharmaceutical Chemistry, Szeged, Hungary.
Michel FlipphiInstitute de Génétique et Microbiologie, Université Paris-Sud, Orsay, France.
Csaba VágvölgyiUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.
Attila GácserHCEMM-USZ Fungal Pathogens Research Group, University of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary.
Claudio ScazzocchioSection of Microbiology, Department of Infectious Diseases, Imperial College, London, United Kingdom. c.scazzocchio@imperial.ac.uk.ORCID 0000-0001-8800-2534
Zsuzsanna HamariUniversity of Szeged Faculty of Science and Informatics, Department of Microbiology, Szeged, Hungary. hamari@bio.u-szeged.hu.ORCID 0000-0001-6374-5083
University of Szeged · HUCentre National de la Recherche Scientifique · FRUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several strikingly different aerobic and anaerobic pathways of nicotinate breakdown are extant in bacteria. Here, through reverse genetics and analytical techniques we elucidated in Aspergillus nidulans, a complete eukaryotic nicotinate utilization pathway. The pathway extant in this fungus and other ascomycetes, is quite different from bacterial ones. All intermediate metabolites were identified. The cognate proteins, encoded by eleven genes (hxn) mapping in three clusters are co-regulated by a specific transcription factor. Several enzymatic steps have no prokaryotic equivalent and two metabolites, 3-hydroxypiperidine-2,6-dione and 5,6-dihydroxypiperidine-2-one, have not been identified previously in any organism, the latter being a novel chemical compound. Hydrolytic ring opening results in α-hydroxyglutaramate, a compound not detected in analogous prokaryotic pathways. Our earlier phylogenetic analysis of Hxn proteins together with this complete biochemical pathway illustrates convergent evolution of catabolic pathways between fungi and bacteria.

Indexed as

Aspergillus nidulansNiacinEukaryotaPhylogenyTranscription FactorsNiacinTranscription Factors

Identifiers

PMID35864155
PMCPMC9304392
OpenAlexW4286111684

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.