Evidence map›Paper›PMID 35862789›Full record

ArticleJournal of bacteriology2022

Genome-Wide Identification of the LexA-Mediated DNA Damage Response in Streptomyces venezuelae.

Kathryn J Stratton, Matthew J Bush, Govind Chandra, Clare E M Stevenson, Kim C Findlay, Susan Schlimpert

Open access · hybridAbstract read
In one paragraph

Article in Journal of bacteriology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Harnessing regulatory networks in Actinobacteria for natural product discovery.Journal of industrial microbiology & biotechnology · 2024
    Review
  7. Article
  8. Review
  9. Genome Analysis of a Variant ofMicroorganisms · 2023
    Article
  10. Small molecule inducers of actinobacteria natural product biosynthesis.Journal of industrial microbiology & biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kathryn J StrattonDepartment of Molecular Microbiology, John Innes Centregrid.14830.3e, Norwich Research Park, Norwich, United Kingdom.
Matthew J BushDepartment of Molecular Microbiology, John Innes Centregrid.14830.3e, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0001-8216-0152
Govind ChandraDepartment of Molecular Microbiology, John Innes Centregrid.14830.3e, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0002-7882-6676
Clare E M StevensonDepartment of Biochemistry and Metabolism, John Innes Centregrid.14830.3e, Norwich Research Park, Norwich, United Kingdom.
Kim C FindlayDepartment of Cell and Developmental Biology, John Innes Centregrid.14830.3e, Norwich Research Park, Norwich, United Kingdom.
Susan SchlimpertDepartment of Molecular Microbiology, John Innes Centregrid.14830.3e, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0001-6364-8056
John Innes Centre · GB

Funding

Royal Society (The Royal Society) RGF\EA\181026Royal Society (The Royal Society) URF\R1\180075UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/J004561/1
6 · The paper itself

Abstract

DNA damage triggers a widely conserved stress response in bacteria called the SOS response, which involves two key regulators, the activator RecA and the transcriptional repressor LexA. Despite the wide conservation of the SOS response, the number of genes controlled by LexA varies considerably between different organisms. The filamentous soil-dwelling bacteria of the genus

Indexed as

Bacterial ProteinsStreptomycesDNA DamageGene Expression Regulation, BacterialRec A RecombinasesSerine EndopeptidasesBacterial ProteinsRec A RecombinasesSerine EndopeptidasesDNA damageLexARecASOS responseStreptomyces

Identifiers

PMID35862789
PMCPMC9380542
OpenAlexW4285085628

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.