Evidence map›Paper›PMID 35862786›Full record

ArticlemBio2022

Metabolite Damage and Damage Control in a Minimal Genome.

Drago Haas, Antje M Thamm, Jiayi Sun, Lili Huang, Lijie Sun, Guillaume A W Beaudoin, Kim S Wise, Claudia Lerma-Ortiz, Steven D Bruner, Marian Breuer and 12 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Dynamics of chromosome organization in a minimal bacterial cell.Frontiers in cell and developmental biology · 2023
    Article
  10. A roadmap for the functional annotation of protein families: a community perspective.Database : the journal of biological databases and curation · 2022
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Drago HaasDepartment of Microbiology and Cell Science, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Antje M ThammHorticultural Sciences Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Jiayi SunHorticultural Sciences Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Lili HuangFood Science and Human Nutrition Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Lijie SunJ. Craig Venter Institutegrid.469946.0, La Jolla, California, USA.
Guillaume A W BeaudoinHorticultural Sciences Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Kim S WiseJ. Craig Venter Institutegrid.469946.0, La Jolla, California, USA.
Claudia Lerma-OrtizHorticultural Sciences Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Steven D BrunerChemistry Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Marian BreuerMaastricht Centre for Systems Biology (MaCSBio), Maastricht Universitygrid.5012.6, Maastricht, The Netherlands.
Zaida Luthey-SchultenDepartment of Chemistry, University of Illinois at Urbana-Champaigngrid.35403.31, Urbana, Illinois, USA.
Jiusheng LinDepartment of Biochemistry, University of Nebraska, Lincoln, Nebraska, USA.
Mark A WilsonDepartment of Biochemistry, University of Nebraska, Lincoln, Nebraska, USA.
Greg BrownDepartment of Chemical Engineering and Applied Chemistry, University of Torontogrid.17063.33, Toronto, Canada.
Alexander F YakuninDepartment of Chemical Engineering and Applied Chemistry, University of Torontogrid.17063.33, Toronto, Canada.
Inna KurilyakWest Coast Metabolomics Center, UC Davis, Davis, California, USA.
Jacob FolzWest Coast Metabolomics Center, UC Davis, Davis, California, USA.
Oliver FiehnWest Coast Metabolomics Center, UC Davis, Davis, California, USA.
John I GlassJ. Craig Venter Institutegrid.469946.0, La Jolla, California, USA.
Andrew D HansonHorticultural Sciences Department, University of Floridagrid.15276.37, Gainesville, Florida, USA.
Christopher S HenryData Science and Learning, Argonne National Laboratory, Argonne, Illinois, USA.
Valérie de Crécy-LagardDepartment of Microbiology and Cell Science, University of Floridagrid.15276.37, Gainesville, Florida, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Analysis of the genes retained in the minimized

Indexed as

Genome, BacterialMetabolomicsOxidoreductasesOxidoreductasescomparative genomicshydrolasemetabolite repairmetabolomicsminimal genome

Identifiers

PMID35862786
PMCPMC9426524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.