Evidence map›Paper›PMID 35862771›Full record

ArticlemBio2022

A Multitrait Locus Regulates Sarbecovirus Pathogenesis.

Alexandra Schäfer, Sarah R Leist, Lisa E Gralinski, David R Martinez, Emma S Winkler, Kenichi Okuda, Padraig E Hawkins, Kendra L Gully, Rachel L Graham, D Trevor Scobey and 22 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Animal models of Long Covid: A hit-and-run disease.Science translational medicine · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Positive-strand RNA viruses-a Keystone Symposia report.Annals of the New York Academy of Sciences · 2023
    Article
  20. Animal models for COVID-19 and tuberculosis.Frontiers in immunology · 2023
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

32 authors at 2 institutions in 1 country.

Alexandra SchäferDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Sarah R LeistDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Lisa E GralinskiDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
David R MartinezDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Emma S WinklerDepartment of Medicine, Washington University School of Medicine, St. Louis, Missouri, USA.
Kenichi OkudaMarsico Lung Institute, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Padraig E HawkinsMarsico Lung Institute, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Kendra L GullyDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Rachel L GrahamDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
D Trevor ScobeyDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Timothy A BellDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Pablo HockDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Ginger D ShawDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Jennifer F LoomeDepartment of Microbiology and Immunology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Emily A MaddenDepartment of Microbiology and Immunology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Elizabeth AndersonDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Victoria K BaxterDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Sharon A Taft-BenzDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Mark R ZweigartDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Samantha R MayDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Stephanie DongDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Matthew ClarkDepartment of Microbiology and Immunology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Darla R MillerDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Rachel M LynchDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Mark T HeiseDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.ORCID 0000-0001-5829-8477
Roland TischDepartment of Microbiology and Immunology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Richard C BoucherMarsico Lung Institute, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Fernando Pardo Manuel de VillenaDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Stephanie A MontgomeryDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Michael S DiamondDepartment of Medicine, Washington University School of Medicine, St. Louis, Missouri, USA.
Martin T FerrisDepartment of Genetics, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.
Ralph S BaricDepartment of Epidemiology, University of North Carolina at Chapel Hillgrid.10698.36, Chapel Hill, North Carolina, USA.ORCID 0000-0001-6827-8701
University of North Carolina at Chapel Hill · USWashington University in St. Louis · US

Funding

Unlocking Zika Virus Immune Control and Pathogenesis with the Collaborative CrossU19AI100625 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PARDO-MANUEL DE VILLENA, FERNANDO · 2012 to 2021
$36.6M
Respiratory Virus Vaccine and Adjuvant Exploration - Equipment SupplementU01AI149644 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S · 2019 to 2023
$6.1M
Genetic Analysis of COVID-19 Susceptibility and Resistance Determinants in the Collaborative CrossR01AI157253 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S, HEISE, MARK T · 2020 to 2024
$3.8M
Pathogenesis of and host response to chikungunya virus infection of the central nervous systemK01OD026529 · OD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BAXTER, VICTORIA K · 2018 to 2022
$631k
Howard Hughes Medical InstituteNIAID NIH HHS HHSN272201700035INIAID NIH HHS R01 AI157253NIAID NIH HHS U01 AI149644NIAID NIH HHS U19 AI100625NIH HHS K01 OD026529
6 · The paper itself

Abstract

Infectious diseases have shaped the human population genetic structure, and genetic variation influences the susceptibility to many viral diseases. However, a variety of challenges have made the implementation of traditional human Genome-wide Association Studies (GWAS) approaches to study these infectious outcomes challenging. In contrast, mouse models of infectious diseases provide an experimental control and precision, which facilitates analyses and mechanistic studies of the role of genetic variation on infection. Here we use a genetic mapping cross between two distinct Collaborative Cross mouse strains with respect to severe acute respiratory syndrome coronavirus (SARS-CoV) disease outcomes. We find several loci control differential disease outcome for a variety of traits in the context of SARS-CoV infection. Importantly, we identify a locus on mouse chromosome 9 that shows conserved synteny with a human GWAS locus for SARS-CoV-2 severe disease. We follow-up and confirm a role for this locus, and identify two candidate genes,

Indexed as

Communicable DiseasesCOVID-19Severe acute respiratory syndrome-related coronavirusVirus DiseasesAnimalsCollaborative Cross MiceGenome-Wide Association StudyHumansMiceSARS-CoV-2collaborative crosshost responsepathogenesissarbecovirusesSARS-CoV-2

Identifiers

PMID35862771
PMCPMC9426612
OpenAlexW4285090280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.