Evidence map›Paper›PMID 35862707›Full record

ArticleJournal of virology2022

Influenza A Virus Agnostic Receptor Tropism Revealed Using a Novel Biological System with Terminal Sialic Acid Knockout Cells.

Haruhiko Kamiki, Shin Murakami, Takashi Nishikaze, Takahiro Hiono, Manabu Igarashi, Yuki Furuse, Hiromichi Matsugo, Hiroho Ishida, Misa Katayama, Wataru Sekine and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. H3N2 influenza A virus gradually adapts to human-type receptor binding and entry specificity after the start of the 1968 pandemic.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Haruhiko Kamiki *Laboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.
Shin Murakami *Laboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.ORCID 0000-0003-0274-9165
Takashi NishikazeKoichi Tanaka Mass Spectrometry Research Laboratory, Shimadzu Corporation, Nishinokyo-Kuwabaracho, Kyoto, Japan.
Takahiro HionoMolecular and Cellular Glycoproteomics Research Group, Cellular and Molecular Biotechnology Research Institute, National Institute of Advanced Industrial Science & Technology, Tsukuba, Japan.
Manabu IgarashiDivision of Global Epidemiology, International Institute for Zoonosis Control, Hokkaido Universitygrid.39158.36, Sapporo, Japan.
Yuki FuruseInstitute for Frontier Life and Medical Sciences, Kyoto Universitygrid.258799.8, Kyoto, Japan.
Hiromichi MatsugoLaboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.
Hiroho IshidaLaboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.
Misa KatayamaLaboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.
Wataru SekineLaboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.
Yasushi MurakiIwate Medical University, Morioka, Japan.ORCID 0000-0001-8772-8018
Masateru TakahashiResearch Institute for Environmental Sciences and Public Health of Iwate Prefecture, Morioka, Japan.
Akiko Takenaka-UemaLaboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.
Taisuke HorimotoLaboratory of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyogrid.26999.3d, Tokyo, Japan.ORCID 0000-0002-9201-9424
The University of Tokyo · JPHokkaido University · JPIwate Medical University · JPKyoto University · JPNational Institute of Advanced Industrial Science and Technology · JPResearch Institute for Environmental Sciences and Public Health of Iwate Prefecture · JPShimadzu (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avian or human influenza A viruses bind preferentially to avian- or human-type sialic acid receptors, respectively, indicating that receptor tropism is an important factor for determining the viral host range. However, there are currently no reliable methods for analyzing receptor tropism biologically under physiological conditions. In this study, we established a novel system using MDCK cells with avian- or human-type sialic acid receptors and with both sialic acid receptors knocked out (KO). When we examined the replication of human and avian influenza viruses in these KO cells, we observed unique viral receptor tropism that could not be detected using a conventional solid-phase sialylglycan binding assay, which directly assesses physical binding between the virus and sialic acids. Furthermore, we serially passaged an engineered avian-derived H4N5 influenza virus, whose PB2 gene was deleted, in avian-type receptor KO cells stably expressing PB2 to select a mutant with enhanced replication in KO cells; however, its binding to human-type sialylglycan was undetectable using the solid-phase binding assay. These data indicate that a panel of sialic acid receptor KO cells could be a useful tool for determining the biological receptor tropism of influenza A viruses. Moreover, the PB2KO virus experimental system could help to safely and efficiently identify the mutations required for avian influenza viruses to adapt to human cells that could trigger a new influenza pandemic.

Indexed as

Influenza A virusN-Acetylneuraminic AcidReceptors, Cell SurfaceReceptors, VirusViral TropismVirus InternalizationAnimalsBirdsDogsGene Knockout TechniquesHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza, HumanInfluenza in BirdsMadin Darby Canine Kidney CellsHemagglutinin Glycoproteins, Influenza VirusN-Acetylneuraminic AcidReceptors, Cell SurfaceReceptors, Virussialic acid receptorinfluenza A virusmutantreceptor tropismreverse geneticssialylglycan

Identifiers

PMID35862707
PMCPMC9364805
OpenAlexW4285803461

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.