Evidence map›Paper›PMID 35862544›Full record

ArticleScience (New York, N.Y.)2022

Massively parallel pooled screening reveals genomic determinants of nanoparticle delivery.

Natalie Boehnke, Joelle P Straehla, Hannah C Safford, Mustafa Kocak, Matthew G Rees, Melissa Ronan, Danny Rosenberg, Charles H Adelmann, Raghu R Chivukula, Namita Nabar and 7 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 1 pooled it
15.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 1 synthesis or guideline pooled it, 191 citations in OpenAlex.

  1. Pooled it
  2. Exploring the anticancer potential of epigallocatechin gallate-loaded sodium alginate nanoparticles: impact of size variation on head and neck cancer cells.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Article
  3. Review
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  11. Surface-Capped Protein Nanoparticles for Nonviral Gene Delivery.Advanced materials (Deerfield Beach, Fla.) · 2026
    Article
  12. Review
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  17. Article
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 1 country.

Natalie Boehnke *Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.ORCID 0000-0002-3468-2033
Joelle P Straehla *Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.ORCID 0000-0002-9446-1718
Hannah C SaffordKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Mustafa KocakBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Matthew G ReesBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Melissa RonanBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.ORCID 0000-0003-4269-1404
Danny RosenbergBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Charles H AdelmannCutaneous Biology Research Center, Massachusetts General Hospital Department of Dermatology, Harvard Medical School, Boston, MA 02114, USA.
Raghu R ChivukulaWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA.
Namita NabarKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Adam G BergerKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Nicholas G LamsonKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.ORCID 0000-0002-6961-1577
Jaime H CheahKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.ORCID 0000-0003-4455-4219
Hojun LiKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Jennifer A RothBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.ORCID 0000-0002-5117-5586
Angela N KoehlerKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.ORCID 0000-0001-6980-5534
Paula T HammondKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.ORCID 0000-0002-9835-192X
Broad Institute · USMassachusetts Institute of Technology · USInstitute for Soldier Nanotechnologies · USBoston Children's Hospital · USHarvard University · USMassachusetts General Hospital · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Kristin A Knouse · 1985 to 2026
$93.9M
Research Training in Pediatric OncologyT32CA136432 · NCI · DANA-FARBER CANCER INST · PI SCOTT A ARMSTRONG · 2009 to 2026
$7.9M
Regulating proliferation and differentiation of erythroid progenitorsK08DK123414 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LI, HOJUN · 2020 to 2024
$828k
Understanding drug delivery through an integrated barcoding approachR00CA255844 · NCI · UNIVERSITY OF MINNESOTA · PI BOEHNKE, NATALIE · 2022 to 2024
$584k
Understanding drug delivery through an integrated barcoding approachK99CA255844 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOEHNKE, NATALIE · 2021 to 2022
$308k
Controlled release of RNA-targeting therapy to promote healing of diabetic ulcersF30DK130564 · NIDDK · HARVARD MEDICAL SCHOOL · PI BERGER, ADAM G · 2021 to 2025
$257k
Genetic identification of novel mTORC1 regulators and homeostatic signaling mechanismsF31CA228241 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ADELMANN, CHARLES HANK · 2018 to 2020
$134k
NCI NIH HHS F31 CA228241NCI NIH HHS K99 CA255844NCI NIH HHS P30 CA014051NCI NIH HHS R00 CA255844NCI NIH HHS T32 CA136432NIDDK NIH HHS F30 DK130564NIDDK NIH HHS K08 DK123414Wellcome Trust
6 · The paper itself

Abstract

To accelerate the translation of cancer nanomedicine, we used an integrated genomic approach to improve our understanding of the cellular processes that govern nanoparticle trafficking. We developed a massively parallel screen that leverages barcoded, pooled cancer cell lines annotated with multiomic data to investigate cell association patterns across a nanoparticle library spanning a range of formulations with clinical potential. We identified both materials properties and cell-intrinsic features that mediate nanoparticle-cell association. Using machine learning algorithms, we constructed genomic nanoparticle trafficking networks and identified nanoparticle-specific biomarkers. We validated one such biomarker: gene expression of

Indexed as

Antineoplastic AgentsBiomarkers, PharmacologicalCopper Transport ProteinsDrug CompoundingNanoparticle Drug Delivery SystemNanoparticlesNeoplasmsAnimalsCell Line, TumorGene ExpressionGenomicsHumansLiposomesMiceNanomedicineAntineoplastic AgentsBiomarkers, PharmacologicalCopper Transport ProteinsLiposomesNanoparticle Drug Delivery System

Identifiers

PMID35862544
PMCPMC10249039
OpenAlexW4286488836

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.