Evidence map›Paper›PMID 35861117›Full record

ArticleInternational journal of immunogenetics2022

VDR gene polymorphisms are associated with the increased susceptibility to COVID-19 among iranian population: A case-control study.

Ali Jafarpoor, Seyed Mohammad Jazayeri, Farah Bokharaei-Salim, Angila Ataei-Pirkooh, Azam Ghaziasadi, Saber Soltani, Ahmadreza Sadeghi, Shima Sadeghipoor Marvi, Vahdat Poortahmasebi, Seyed Mahmood Seyed Khorrami and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of immunogenetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
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  11. Association ofGenes · 2023
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  13. VDR gene polymorphisms and susceptibility to COVID-19: Correspondence.International journal of immunogenetics · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Ali JafarpoorResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Seyed Mohammad JazayeriResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Farah Bokharaei-SalimDepartment of Virology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Angila Ataei-PirkoohDepartment of Virology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Azam GhaziasadiResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-8595-9530
Saber SoltaniResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Ahmadreza SadeghiResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Shima Sadeghipoor MarviResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Vahdat PoortahmasebiResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Seyed Mahmood Seyed KhorramiMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Mandana HasanzadMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Negar ParsaniaMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Sina NagozirMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Narges MokhtariMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Ali ParsaniaMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Asma BahramiMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Mohammad Hossein NadjarhaMedical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Reza PakzadFaculty of Health, Department of Epidemiology, Ilam University of Medical Sciences, Ilam, Iran.
Masoud ParsaniaResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.
Global Virus Network · USIran University of Medical Sciences · IRMedical University of Ilam · IRTabriz University of Medical Sciences · IRUniversity of Tehran · IR

Funding

Iranian Ministry of Health 1603001056
6 · The paper itself

Abstract

Coronavirus disease 2019 (COVID-19) is an infectious disease caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), but the pathogenesis is unclear. Host genetic background is one of the main factors influencing the patients' susceptibility to several viral infectious diseases. This study aimed to investigate the association between host genetic polymorphisms of two genes, including vitamin D receptor (VDR) and vitamin D binding protein (DBP), and susceptibility to COVID-19 in a sample of the Iranian population. This case-control study enrolled 188 hospitalized COVID-19 patients as the case group and 218 suspected COVID-19 patients with mild signs as the control group. The VDR (rs7975232, rs731236 and rs2228570) and DBP (rs7041) gene single nucleotide polymorphisms (SNPs) were genotyped by Polymerase Chain Reaction Restriction - Fragment Length Polymorphism (PCR-RFLP) method. A significant association between rs2228570 SNP in the VDR gene and the susceptibility of COVID-19 was found between case and control groups. The CT genotype (Heterozygous) of rs2228570 C > T polymorphism showed significant association with a 3.088 fold increased odds of COVID-19 (p < .0001; adjusted OR: 3.088; 95% CI: 1.902-5.012). In addition, a significant association between CC genotype of rs2228570 CT polymorphism and increased odds of COVID-19 in male and female groups (p = .001; adjusted OR: 3.125; 95% CI: 1.630-5.991 and p = .002; adjusted OR: 3.071; 95% CI: 1.485-6.354 respectively) were determined. Our results revealed no significant differences in the frequency of genotype and allele of VDR (rs7975232 and rs731236) and DBP (rs7041) between SARS-CoV-2-infected patients and controls (p > .05). Our results showed that polymorphism of VDR (rs2228570) probably could influence individual susceptibility to COVID-19. The polymorphisms of VDR (rs7975232 and rs731236) and DBP (rs7041) were not associated with SARS-CoV-2 infection susceptibility.

Indexed as

COVID-19Case-Control StudiesFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansIranMalePolymorphism, Single NucleotideReceptors, CalcitriolSARS-CoV-2Receptors, CalcitriolVDR protein, humanCOVID-19DBPgenetic polymorphismsusceptibilityVDR

Identifiers

PMID35861117
PMCPMC9350092
OpenAlexW4286500386

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.