Evidence map›Paper›PMID 35860865›Full record

ArticleThe New phytologist2022

Evidence of chromatin and transcriptional dynamics for cold development in peach flower bud.

Monica Canton, Cristian Forestan, Gianpiero Marconi, Esther Carrera, Claudio Bonghi, Serena Varotto

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Molecular advances in bud dormancy in trees.Journal of experimental botany · 2024
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Molecular Mechanisms of Seasonal Gene Expression in Trees.International journal of molecular sciences · 2024
    Review
  16. Class III Peroxidases in the Peach (Plants (Basel, Switzerland) · 2024
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Monica CantonDepartment of Agronomy Food Natural Resources, Animals and Environment (DAFNAE) Agripolis, University of Padova, 35020, Legnaro, PD, Italy.ORCID 0000-0002-6104-9786
Cristian ForestanDepartment of Agricultural and Food Sciences (DISTAL), University of Bologna, 40127, Bologna, BO, Italy.ORCID 0000-0002-1712-825X
Gianpiero MarconiDepartment Agricultural, Food and Environmental Sciences, University of Perugia, 06121, Perugia, Italy.ORCID 0000-0003-2669-0399
Esther CarreraInstituto de Biologıa Molecular y Celular de Plantas (IBMCP), Universidad Politecnica de Valencia-Consejo Superior de Investigaciones Cientıficas (CSIC), Valencia, Spain.ORCID 0000-0002-3454-7552
Claudio BonghiDepartment of Agronomy Food Natural Resources, Animals and Environment (DAFNAE) Agripolis, University of Padova, 35020, Legnaro, PD, Italy.ORCID 0000-0002-7100-8160
Serena VarottoDepartment of Agronomy Food Natural Resources, Animals and Environment (DAFNAE) Agripolis, University of Padova, 35020, Legnaro, PD, Italy.ORCID 0000-0001-5219-7157
University of Padua · ITConsejo Superior de Investigaciones Científicas · ESUniversity of Bologna · ITUniversity of Perugia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In temperate zones, fruit trees regulate their annual growth cycle to seasonal environmental changes. During the cold season, growth is limited by both environmental and genetic factors. After the exposure to low temperature and fulfillment of chilling requirements, mild temperatures promote the growth and flowering. However, an insufficient chilling exposure may lead to nonuniform blooming, with a negative impact on fruit set. To gain insights into flower development in the fruit tree buds, peach is an interesting model, the flower and vegetative bud being distinct organs. To understand how flower bud development is regulated, we integrated cytological observations and epigenetic and chromatin genome-wide data with transcriptional changes to identify the main regulatory factors involved in flower development during chilling accumulation. We demonstrated that growth cessation does not occur in peach flower buds during chilling accumulation, but that there are changes in transcript abundance of key genes of hormone metabolism and flower bud development, distribution of histone modifications (H3K4me3 and H3K27me3) and DNA methylation. Altogether, our findings indicate that during the cold season the flower bud is in a nondormant state and that the chilling experience allows flower differentiation to be completed.

Indexed as

Prunus persicaChromatinCold TemperatureFlowersGene Expression Regulation, PlantHistonesHormonesChromatinHistonesHormonesbud dormancyChIP-SeqDNA methylationPrunus persicaRNA-Seq

Identifiers

PMID35860865
PMCPMC9804738
OpenAlexW4286501322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.