Evidence map›Paper›PMID 35859217›Full record

ArticleRice (New York, N.Y.)2022

OsSNDP3 Functions for the Polar Tip Growth in Rice Pollen Together with OsSNDP2, a Paralog of OsSNDP3.

Sunok Moon, Yu-Jin Kim, Ha Eun Park, Junhyup Kim, Yun Shil Gho, Woo-Jong Hong, Eui-Jung Kim, Su Kyoung Lee, Byung-Chang Suh, Gynheung An and 1 more

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Sunok MoonDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Yu-Jin KimDepartment of Life Science and Environmental Biochemistry, and Life and Industry Convergence Research Institute, Pusan National University, Miryang-si, 50463, Korea.
Ha Eun ParkDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Junhyup KimDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Yun Shil GhoDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Woo-Jong HongDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Eui-Jung KimDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Su Kyoung LeeDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Byung-Chang SuhDepartment of Brain Sciences, DGIST, Daegu, 42988, Korea.
Gynheung AnDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea.
Ki-Hong JungDepartment of Genetic Engineering and Crop Biotech Institute, Kyung Hee University, Yongin, 17104, Korea. khjung2010@khu.ac.kr.
Kyung Hee University · KRDaegu Gyeongbuk Institute of Science and Technology · KRPusan National University · KR

Funding

National Research Foundation of Korea 2020R1A2C1011687National Research Foundation of Korea 2021M3E5E6025387Rural Development Administration PJ01661002
6 · The paper itself

Abstract

Understanding pollen tube growth is critical for crop yield maintenance. The pollen tube provides a path for sperm cells for fertilization with egg cells. Cells must be subdivided into functionally and structurally distinct compartments for polar tip growth, and phosphoinositides are thought to be one of the facilitators for polarization during pollen tube growth. OsSNDP3 encodes Sec14-nodulin domain-containing protein and localizes in the nucleus and the microdomains of the plasma membrane in tobacco leaf epidermis cells. OsSNDP3 is thought to bind with phosphatidylinositol 4,5-bisphosphate based on the data including the information of basic amino acids in the C-terminal and colocalization with 2X Pleckstrin homology domain of Phospholipase C delta-1. OsSNDP3 interacts with a protein that contains a class I nodulin domain. We discovered that OsSNDP3 plays a significant role in pollen tube germination using CRISPR/Cas9 systems, whereas another pollen-preferential Sec14-nodulin domain-containing protein, OsSNDP2, additively functions with OsSNDP3 during pollen tube germination. Gene Ontology analysis using downregulated genes in ossndp3 indicated that the expression of genes involved in the phosphatidylinositol metabolic process and tip growth was significantly altered in ossndp3. OsSNDP3 aids pollen polar tip growth by binding with phosphatidylinositol 4,5-bisphosphate. We can better understand the roles of phosphoinositides during pollen tube growth by studying the functions of OsSNDP3 and OsSNDP2. And downregulated genes in ossndp3 might be useful targets for future research on polar tip growth.

Identifiers

PMID35859217
PMCPMC9300783
OpenAlexW4286008633

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.