Evidence map›Paper›PMID 35858571›Full record

ArticleCell reports2022

Stress-induced perturbations in intracellular amino acids reprogram mRNA translation in osmoadaptation independently of the ISR.

Dawid Krokowski, Raul Jobava, Krzysztof J Szkop, Chien-Wen Chen, Xu Fu, Sarah Venus, Bo-Jhih Guan, Jing Wu, Zhaofeng Gao, Wioleta Banaszuk and 15 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 4 countries.

Dawid KrokowskiDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA; Department of Molecular Biology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Lublin, Poland. Electronic address: krokud@gmail.com.
Raul JobavaDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA; Department of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Krzysztof J SzkopDepartment of Oncology-Pathology, Science for Life Laboratories, Karolinska Institute, Stockholm, Sweden.
Chien-Wen ChenDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Xu FuDepartment of Physiology and Biophysics, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Sarah VenusDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Bo-Jhih GuanDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Jing WuDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Zhaofeng GaoDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Wioleta BanaszukDepartment of Molecular Biology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Lublin, Poland.
Marek TchorzewskiDepartment of Molecular Biology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Lublin, Poland; EcoTech-Complex Centre, Maria Curie-Skłodowska University, Lublin, Poland.
Tingwei MuDepartment of Physiology and Biophysics, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Phil RopelewskiDepartment of Physiology and Biophysics, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
William C MerrickDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Yuanhui MaoDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA.
Aksoylu Inci SevvalDepartment of Oncology-Pathology, Science for Life Laboratories, Karolinska Institute, Stockholm, Sweden.
Helen MirandaDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Shu-Bing QianDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA.
Maria ManifavaSignalling Programme, Babraham Institute, Cambridge, UK.
Nicholas T KtistakisSignalling Programme, Babraham Institute, Cambridge, UK.
Anastasios VourekasDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Eckhard JankowskyDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Ivan TopisirovicThe Lady Davis Institute, Jewish General Hospital, Montréal, QC, Canada; Gerald Bronfman Department of Oncology, McGill University, Montréal, QC, Canada; Department of Biochemistry and Division of Experimental Medicine, McGill University, Montréal, QC, Canada. Electronic address: ivan.topisirovic@mcgill.ca.
Ola LarssonDepartment of Oncology-Pathology, Science for Life Laboratories, Karolinska Institute, Stockholm, Sweden. Electronic address: ola.larsson@ki.se.
Maria HatzoglouDepartment of Genetics and Genome Sciences, School of Medicine, Case Western Reserve University, Cleveland, OH, USA. Electronic address: mxh8@case.edu.
Case Western Reserve University · USBabraham Institute · GBCornell University · USKarolinska Institutet · SELouisiana State University · USMaria Curie-Skłodowska University · PLScience for Life Laboratory · SE

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
The Cleveland Digestive Diseases Research Core Center (DDRCC)P30DK097948 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI Fabio Cominelli · 2015 to 2026
$15.6M
Regulation of Gene Expression During StressR01DK053307 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI HATZOGLOU, MARIA · 1998 to 2021
$9.6M
Translational Control by NutrientsR01DK060596 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI MARIA HATZOGLOU · 2002 to 2026
$6.3M
Translational Control by Osmotically Active SolutesR37DK060596 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI HATZOGLOU, MARIA · 2011 to 2020
$5.3M
Enzymes and enzyme complexes in RNA metabolismR35GM118088 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI JANKOWSKY, ECKHARD · 2016 to 2022
$4.3M
Understanding GABAA receptor protein folding and misfoldingR01NS105789 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI Tingwei Mu · 2018 to 2026
$3.9M
TWO-YEAR TO FOUR-YEAR TRANSITION PROGRAMR25GM049010 · NIGMS · CUYAHOGA COMMUNITY COLLEGE · PI GATICA, JORGE E, HATZOGLOU, MARIA · 1993 to 2018
$3.2M
Sarcopenia in cirrhosis is mediated by a hyperammonemic stress responseR01DK113196 · NIDDK · CLEVELAND CLINIC LERNER COM-CWRU · PI DASARATHY, SRINIVASAN, HATZOGLOU, MARIA · 2018 to 2021
$2.3M
Study of AR transcriptional network in stem cell model of SBMAR01NS121374 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI MIRANDA, HELEN C · 2021 to 2025
$2.0M
Bridges to the Baccalaureate Research Training Program at Cuyahoga Community CollegeT34GM137792 · NIGMS · CUYAHOGA COMMUNITY COLLEGE · PI GATICA, JORGE E, HATZOGLOU, MARIA · 2020 to 2024
$1.8M
Assembly Chaperone Complex for Membrane Proteins in the Endoplasmic ReticulumR01NS117176 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI MU, TINGWEI · 2020 to 2023
$1.6M
Biotechnology and Biological Sciences Research Council BBS/E/B/000C0413NCI NIH HHS F30 CA247347NIDDK NIH HHS P30 DK097948NIDDK NIH HHS R01 DK053307NIDDK NIH HHS R01 DK060596NIDDK NIH HHS R01 DK113196NIDDK NIH HHS R37 DK060596NIGMS NIH HHS R01 GM128981NIGMS NIH HHS R25 GM049010NIGMS NIH HHS R35 GM118088NIGMS NIH HHS T32 GM007250NIGMS NIH HHS T34 GM137792NINDS NIH HHS K01 NS116119NINDS NIH HHS R01 NS105789NINDS NIH HHS R01 NS117176NINDS NIH HHS R01 NS121374
6 · The paper itself

Abstract

The integrated stress response (ISR) plays a pivotal role in adaptation of translation machinery to cellular stress. Here, we demonstrate an ISR-independent osmoadaptation mechanism involving reprogramming of translation via coordinated but independent actions of mTOR and plasma membrane amino acid transporter SNAT2. This biphasic response entails reduced global protein synthesis and mTOR signaling followed by translation of SNAT2. Induction of SNAT2 leads to accumulation of amino acids and reactivation of mTOR and global protein synthesis, paralleled by partial reversal of the early-phase, stress-induced translatome. We propose SNAT2 functions as a molecular switch between inhibition of protein synthesis and establishment of an osmoadaptive translation program involving the formation of cytoplasmic condensates of SNAT2-regulated RNA-binding proteins DDX3X and FUS. In summary, we define key roles of SNAT2 in osmotolerance.

Indexed as

Amino AcidsAmino Acid Transport System AAmino Acid Transport SystemsProtein BiosynthesisTOR Serine-Threonine KinasesAmino AcidsAmino Acid Transport System AAmino Acid Transport SystemsTOR Serine-Threonine Kinasesamino acidsCP: Molecular biologycytoplasmic condensateshypertonic stressmTOR signalingosmolytesosmotolerancetranslation

Identifiers

PMID35858571
PMCPMC9491157
OpenAlexW4286252655

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.