Evidence map›Paper›PMID 35857476›Full record

ArticleScience advances2022

A phospho-tyrosine-based signaling module using SPOP, CSK, and LYN controls TLR-induced IRF activity.

Kazuki Tawaratsumida, Vanessa Redecke, Ruiqiong Wu, Jeeba Kuriakose, Jill J Bouchard, Tanja Mittag, Brian K Lohman, Ashutosh Mishra, Anthony A High, Hans Häcker

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Editorial: Regulation and dysfunction of CSK and CHK.Frontiers in cell and developmental biology · 2023
    Article
  11. Regulation, targets and functions of CSK.Frontiers in cell and developmental biology · 2023
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Kazuki TawaratsumidaLaboratory of Innate Immunity and Signal Transduction, Department of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.ORCID 0000-0001-6611-3217
Vanessa RedeckeLaboratory of Innate Immunity and Signal Transduction, Department of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.ORCID 0000-0002-2790-7070
Ruiqiong WuDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.ORCID 0000-0003-4776-0480
Jeeba KuriakoseChildren's GMP, LLC., St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Jill J BouchardDepartment of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Tanja MittagDepartment of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.ORCID 0000-0002-1827-3811
Brian K LohmanBioinformatics Shared Resource, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Ashutosh MishraCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.ORCID 0000-0002-0953-969X
Anthony A HighCenter for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.ORCID 0000-0003-2323-5649
Hans HäckerLaboratory of Innate Immunity and Signal Transduction, Department of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.ORCID 0000-0001-5971-0451
St. Jude Children's Research Hospital · USUniversity of Utah · US

Funding

The role of weak multivalent interactions and phase separation in SPOP tumor suppressor functionR01GM112846 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MITTAG, TANJA · 2015 to 2023
$3.0M
Discovery of small molecules inhibiting Toll-like receptor-mediated inflammationR01AI139014 · NIAID · UNIVERSITY OF UTAH · PI HAECKER, HANS · 2018 to 2021
$2.7M
Pathogenic role of innate immune cells in lupus nephritisR01AI145877 · NIAID · UNIVERSITY OF UTAH · PI HAECKER, HANS · 2019 to 2023
$2.2M
NIAID NIH HHS R01 AI139014NIAID NIH HHS R01 AI145877NIGMS NIH HHS R01 GM112846
6 · The paper itself

Abstract

Toll-like receptors (TLRs) recognize pathogen- and host-derived factors and control immune responses via the adaptor protein MyD88 and members of the interferon regulatory transcription factor (IRF) family. IRFs orchestrate key effector functions, including cytokine release, cell differentiation, and, under certain circumstances, inflammation pathology. Here, we show that IRF activity is generically controlled by the Src kinase family member LYN, which phosphorylates all TLR-induced IRFs at a conserved tyrosine residue, resulting in K48-linked polyubiquitination and proteasomal degradation of IRFs. We further show that LYN activity is controlled by the upstream kinase C-terminal Src kinase (CSK), whose activity, in turn, is controlled by the adaptor protein SPOP, which serves as molecular bridge to recruit CSK into the TLR signaling complex and to activate CSK catalytic activity. Consistently, deletion of SPOP or CSK results in increased LYN activity, LYN-directed IRF degradation, and inhibition of IRF transcriptional activity. Together, the data reveal a key regulatory mechanism for IRF family members controlling TLR biology.

Identifiers

PMID35857476
PMCPMC9269885
OpenAlexW4284971673

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.