Evidence map›Paper›PMID 35857464›Full record

ArticleScience advances2022

Cryo-EM structure of the HIV-1 Pol polyprotein provides insights into virion maturation.

Jerry Joe E K Harrison, Dario Oliveira Passos, Jessica F Bruhn, Joseph D Bauman, Lynda Tuberty, Jeffrey J DeStefano, Francesc Xavier Ruiz, Dmitry Lyumkis, Eddy Arnold

Abstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Mechanisms of HIV-1 assembly, release and maturation.Nature reviews. Microbiology · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Membrane bending energy selects for compact growth of protein assemblies.bioRxiv : the preprint server for biology · 2025
    Article
  14. Role of HIV-encoded proteins in cardiovascular disease.American journal of physiology. Cell physiology · 2025
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jerry Joe E K HarrisonCenter for Advanced Biotechnology and Medicine (CABM), Piscataway, NJ, USA.ORCID 0000-0002-3153-3024
Dario Oliveira PassosThe Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0003-1333-9102
Jessica F BruhnThe Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0002-3356-5994
Joseph D BaumanCenter for Advanced Biotechnology and Medicine (CABM), Piscataway, NJ, USA.
Lynda TubertyCenter for Advanced Biotechnology and Medicine (CABM), Piscataway, NJ, USA.ORCID 0000-0002-7019-9735
Jeffrey J DeStefanoDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, USA.ORCID 0000-0002-8710-7622
Francesc Xavier RuizCenter for Advanced Biotechnology and Medicine (CABM), Piscataway, NJ, USA.ORCID 0000-0002-0457-0030
Dmitry LyumkisThe Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0002-8124-7472
Eddy ArnoldCenter for Advanced Biotechnology and Medicine (CABM), Piscataway, NJ, USA.ORCID 0000-0003-2612-9622

Funding

X-ray Crystallographic Fragment Screening CoreU54AI150472 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI SARAFIANOS, STEFAN G, TORBETT, BRUCE EDWARD · 2019 to 2021
$15.7M
Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
STRUCTURES OF HIV REVERSE TRANSCRIPTASE WITH SUBSTRATESR01AI027690 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI EDWARD ARNOLD · 1989 to 2026
$4.3M
Structural basis for activity of and resistance to HIV integrase inhibitorsR01AI136680 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI LYUMKIS, DMITRY · 2017 to 2021
$3.5M
Structural basis for activity of and resistance to HIV integrase inhibitorsU01AI136680 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI LYUMKIS, DMITRY · 2022 to 2025
$3.4M
Biochemistry of HIV reverse transcriptase fidelity and inhibitor interactionsR01AI150480 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI DESTEFANO, JEFFREY J · 2019 to 2019
$294k
NIAID NIH HHS R01 AI027690NIAID NIH HHS R01 AI136680NIAID NIH HHS R01 AI150480NIAID NIH HHS U01 AI136680NIAID NIH HHS U54 AI150472NIGMS NIH HHS P41 GM103311
6 · The paper itself

Abstract

Key proteins of retroviruses and other RNA viruses are translated and subsequently processed from polyprotein precursors by the viral protease (PR). Processing of the HIV Gag-Pol polyprotein yields the HIV structural proteins and enzymes. Structures of the mature enzymes PR, reverse transcriptase (RT), and integrase (IN) aided understanding of catalysis and design of antiretrovirals, but knowledge of the Pol precursor architecture and function before PR cleavage is limited. We developed a system to produce stable HIV-1 Pol and determined its cryo-electron microscopy structure. RT in Pol has a similar arrangement to the mature RT heterodimer, and its dimerization may draw together two PR monomers to activate proteolytic processing. HIV-1 thus may leverage the dimerization interfaces in Pol to regulate assembly and maturation of polyprotein precursors.

Identifiers

PMID35857464
PMCPMC9258950

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.