Evidence map›Paper›PMID 35854076›Full record

ArticleCommunications biology2022

Genome-wide CRISPR screen for HSV-1 host factors reveals PAPSS1 contributes to heparan sulfate synthesis.

Takeshi Suzuki, Yoshitaka Sato, Yusuke Okuno, Fumi Goshima, Tadahisa Mikami, Miki Umeda, Takayuki Murata, Takahiro Watanabe, Koichi Watashi, Takaji Wakita and 2 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Takeshi SuzukiDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan.ORCID 0000-0001-6291-9774
Yoshitaka SatoDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan. yssato@med.nagoya-u.ac.jp.ORCID 0000-0002-8541-6413
Yusuke OkunoDepartment of Virology, Nagoya City University Graduate School of Medical Sciences, Nagoya, 467-8601, Japan.
Fumi GoshimaDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan.
Tadahisa MikamiLaboratory of Biochemistry, Kobe Pharmaceutical University, Kobe, 658-8558, Japan.
Miki UmedaDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan.
Takayuki MurataDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan.
Takahiro WatanabeDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan.
Koichi WatashiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan.
Takaji WakitaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan.
Hiroshi KitagawaLaboratory of Biochemistry, Kobe Pharmaceutical University, Kobe, 658-8558, Japan.ORCID 0000-0002-9307-7079
Hiroshi KimuraDepartment of Virology, Nagoya University Graduate School of Medicine, Nagoya, 466-8550, Japan. hkimura@med.nagoya-u.ac.jp.ORCID 0000-0001-8063-5660
Nagoya University · JPKobe Pharmaceutical University · JPFujita Health University · JPJapan Science and Technology Agency · JPNagoya City University · JPNational Institute of Infectious Diseases · JPTokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Herpes simplex virus type 1 (HSV-1) is a ubiquitous pathogen that causes various diseases in humans, ranging from common mucocutaneous lesions to severe life-threatening encephalitis. However, our understanding of the interaction between HSV-1 and human host factors remains incomplete. Here, to identify the host factors for HSV-1 infection, we performed a human genome-wide CRISPR screen using near-haploid HAP1 cells, in which gene knockout (KO) could be efficiently achieved. Along with several already known host factors, we identified 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (PAPSS1) as a host factor for HSV-1 infection. The KO of PAPSS1 in HAP1 cells reduced heparan sulfate (HepS) expression, consequently diminishing the binding of HSV-1 and several other HepS-dependent viruses (such as HSV-2, hepatitis B virus, and a human seasonal coronavirus). Hence, our findings provide further insights into the host factor requirements for HSV-1 infection and HepS biosynthesis.

Indexed as

Herpes SimplexHerpesvirus 1, HumanClustered Regularly Interspaced Short Palindromic RepeatsGene Knockout TechniquesHeparan SulfateHumansHeparan Sulfate

Identifiers

PMID35854076
PMCPMC9296583
OpenAlexW4285797731

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.