Evidence map›Paper›PMID 35852706›Full record

ArticlePhotosynthesis research2022

Characterization of regioisomeric diterpenoid tails in bacteriochlorophylls produced by geranylgeranyl reductase from Halorhodospira halochloris and Blastochloris viridis.

Mitsuaki Hirose, Yusuke Tsukatani, Jiro Harada, Hitoshi Tamiaki

Abstract read
PubMed Publisher
In one paragraph

Article in Photosynthesis research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Mitsuaki HiroseGraduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan.ORCID http://orcid.org/0000-0001-9996-4544
Yusuke TsukataniInstitute for Extra-Cutting-Edge Science and Technology Avant-Garde Research (X-Star), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Kanagawa, 237-0061, Japan.ORCID http://orcid.org/0000-0003-2831-8996
Jiro HaradaDepartment of Medical Biochemistry, Kurume University School of Medicine, Fukuoka, 830-0011, Japan.ORCID http://orcid.org/0000-0002-0817-8378
Hitoshi TamiakiGraduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan. tamiaki@fc.ritsumei.ac.jp.ORCID http://orcid.org/0000-0003-4797-0349
Ritsumeikan University · JPJapan Agency for Marine-Earth Science and Technology · JPKurume University Medical Center · JP

Funding

Japan Society for the Promotion of Science 17H06436Japan Society for the Promotion of Science 18H03743Japan Society for the Promotion of Science 19H02018Japan Society for the Promotion of Science 21J22995Japan Society for the Promotion of Science 22H02203
6 · The paper itself

Abstract

Geranylgeranyl reductase (GGR) encoded by the bchP gene catalyzes the reductions of three unsaturated C = C double bonds (C6 = C7, C10 = C11, and C14 = C15) in a geranylgeranyl (GG) group of the esterifying moiety in 17-propionate residue of bacteriochlorophyll (BChl) molecules. It was recently reported that GGR in Halorhodospira halochloris potentially catalyzes two hydrogenations, yielding BChl with a tetrahydrogeranylgeranyl (THGG) tail. Furthermore, its engineered GGR, in which N-terminal insertion peptides characteristic for H. halochloris were deleted, performed single hydrogenation, producing BChl with a dihydrogeranylgeranyl (DHGG) tail. In some of these enzymatic reactions, it remained unclear in which order the C = C double bond in a GG group was first reduced. In this study, we demonstrated that the (variant) GGR from H. halochloris catalyzed an initial reduction of the C6 = C7 double bond to yield a 6,7-DHGG tail. The intact GGR of H. halochloris catalyzed the further hydrogenation of the C14 = C15 double bonds to give a 6,7,14,15-THGG group, whereas deleting the characteristic peptide region from the GGR suppressed the C14 = C15 reduction. We also verified that in a model bacterium, Blastochloris viridis producing standard BChl-b, the reduction of a GG to phytyl group occurred via 10,11-DHGG and 6,7,10,11-THGG. The high-performance liquid chromatographic elution profiles of BChls-a/b employed in this study are essential for identifying the regioisomeric diterpenoid tails in the BChls of phototrophic bacteria distributed in nature and elucidating GGR enzymatic reactions.

Indexed as

BacteriochlorophyllsDiterpenesBacterial ProteinsEctothiorhodospiraceaeHyphomicrobiaceaeOxidoreductasesPropionatesBacterial ProteinsBacteriochlorophyllsDiterpenesgeranylgeranyl reductaseOxidoreductasesPropionatesBiosynthesisHigh-performance liquid chromatographyHydrogenationPhotosynthetic purple bacteriaRegioisomer

Identifiers

PMID35852706
OpenAlexW4285799279

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.