Evidence map›Paper›PMID 35850148›Full record

ArticleNature2022

Bacterial retrons encode phage-defending tripartite toxin-antitoxin systems.

Jacob Bobonis, Karin Mitosch, André Mateus, Nicolai Karcher, George Kritikos, Joel Selkrig, Matylda Zietek, Vivian Monzon, Birgit Pfalz, Sarela Garcia-Santamarina and 10 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
24.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 154 citations in OpenAlex.

  1. How bacterial immune systems sense phage infection.Nature reviews. Microbiology · 2026
    Review
  2. Article
  3. Characterization of defensome genes and mobile genetic Elements in different types of pasture soil agroecosystems from the Brazilian Amazon.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  4. Article
  5. Review
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  7. Article
  8. Article
  9. Article
  10. Article
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  12. Article
  13. Article
  14. Article
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  16. Structure and mechanism of antiphage retron Eco2.Nature structural & molecular biology · 2026
    Article
  17. Review
  18. [Research on Bacteriophage Resistance: Coevolutionary Arms Race Between Bacteria and Phages Drives Novel Antibacterial Therapies].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2026
    Review
  19. Review
  20. Article

47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 6 countries.

Jacob BobonisGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0001-9293-9733
Karin Mitosch *Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
André Mateus *Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0001-6870-0677
Nicolai KarcherStructural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
George KritikosGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-1434-5176
Joel SelkrigGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Matylda ZietekGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Vivian MonzonEuropean Bioinformatics Institute, European Molecular Biology Laboratory, Hinxton, UK.
Birgit PfalzGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Sarela Garcia-SantamarinaGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Marco GalardiniInstitute for Molecular Bacteriology, TWINCORE Centre for Experimental and Clinical Infection Research, a joint venture between the Hannover Medical School (MHH) and the Helmholtz Centre for Infection Research (HZI), Hannover, Germany.
Anna SuekiGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Callie KobayashiDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, College Station, TX, USA.
Frank SteinProteomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0001-9695-1692
Alex BatemanEuropean Bioinformatics Institute, European Molecular Biology Laboratory, Hinxton, UK.ORCID http://orcid.org/0000-0002-6982-4660
Georg ZellerStructural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-1429-7485
Mikhail M SavitskiGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-2011-9247
Johanna R ElfenbeinDepartment of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI, USA. jelfenbein@wisc.edu.ORCID http://orcid.org/0000-0002-4764-0713
Helene L Andrews-PolymenisDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, College Station, TX, USA. handrews@tamu.edu.ORCID http://orcid.org/0000-0002-1818-1335
Athanasios TypasGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany. typas@embl.de.ORCID http://orcid.org/0000-0002-0797-9018
European Molecular Biology Laboratory · DEEuropean Bioinformatics Institute · GBEuropean Molecular Biology Laboratory · DEHeidelberg University · DEHospital of St. Francis Xavier · PTMedizinische Hochschule Hannover · DETexas A&M Health Science Center · USTexas A&M University · USUniversity of Basel · CHUniversity of Wisconsin–Madison · US

Funding

Functional dissection of the retron St-85 of Salmonella TyphimuriumK08AI108794 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI ELFENBEIN, JOHANNA REBECCA · 2014 to 2017
$602k
NIAID NIH HHS K08 AI108794
6 · The paper itself

Abstract

Retrons are prokaryotic genetic retroelements encoding a reverse transcriptase that produces multi-copy single-stranded DNA

Indexed as

AntitoxinsBacteriophagesRetroelementsSalmonella typhimuriumToxin-Antitoxin SystemsDNA, BacterialDNA, Single-StrandedNucleic Acid ConformationProphagesRNA-Directed DNA PolymeraseAntitoxinsDNA, BacterialDNA, Single-StrandedRetroelementsRNA-Directed DNA Polymerase

Identifiers

PMID35850148
PMCPMC11938430
OpenAlexW4285727841

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.