Evidence map›Paper›PMID 35849338›Full record

ArticleNucleic acids research2022

Role of EXO1 nuclease activity in genome maintenance, the immune response and tumor suppression in Exo1D173A mice.

Shanzhi Wang, Kyeryoung Lee, Stephen Gray, Yongwei Zhang, Catherine Tang, Rikke B Morrish, Elena Tosti, Johanna van Oers, Mohammad Ruhul Amin, Paula E Cohen and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Human reproduction open · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 4 countries.

Shanzhi WangDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Kyeryoung LeeDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Stephen GrayDepartment of Biomedical Sciences, Cornell University, NY 14853, USA.ORCID 0000-0003-1483-560X
Yongwei ZhangDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Catherine TangDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY, USA.
Rikke B MorrishCurrent position: School of Physics and Astronomy, University of Exeter, Exeter EX4 4QD, UK.
Elena TostiDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Johanna van OersDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Mohammad Ruhul AminDepartment of Computer and Information Science, Fordham University, Bronx, NY, USA.
Paula E CohenDepartment of Biomedical Sciences, Cornell University, NY 14853, USA.
Thomas MacCarthyDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY, USA.
Sergio RoaDepartment of Biochemistry and Genetics, University of Navarra, 31008Pamplona, Spain.ORCID 0000-0003-1095-0715
Matthew D ScharffDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Winfried EdelmannDepartment of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, NY 10461, USA.
Richard ChahwanInstitute of Experimental Immunology, University of Zurich, Zurich 8057, Switzerland.ORCID 0000-0002-8672-7790
Albert Einstein College of Medicine · USStony Brook University · USCornell University · USFordham University · USInstituto de Salud Carlos III · ESUniversity of Arkansas at Little Rock · USUniversity of Exeter · GBUniversity of Nottingham · GBUniversity of Zurich · CH

Funding

The MLH1-MLH3 Heterodimer in Mammalian Meiotic Recombination and GameogenesisR01HD041012 · NICHD · YESHIVA UNIVERSITY · PI Paula Elaine Cohen · 2003 to 2026
$7.9M
A combined computational and experimental approach to the evolution and role of the DNA sequence environment in targeting mutations to antibody V regionsR01AI132507 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI RIZZO, ROBERT C., SCHARFF, MATTHEW D · 2018 to 2022
$3.0M
Analyzing the Hypersensitivity of MMR-deficient Colorectal Cancers to mTOR Inhibition and the Response of Cancer Stem CellsR01CA248536 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI EDELMANN, WINFRIED · 2021 to 2025
$2.0M
SLX4 as a mediator of crossover pathway decisions in mammalian meiosisR01HD097987 · NICHD · CORNELL UNIVERSITY · PI COHEN, PAULA ELAINE · 2019 to 2023
$1.9M
Biotechnology and Biological Sciences Research Council BB/N017773/2NCI NIH HHS R01 CA248536NIAID NIH HHS R01 AI132507NICHD NIH HHS R01 HD041012NICHD NIH HHS R01 HD097987
6 · The paper itself

Abstract

DNA damage response pathways rely extensively on nuclease activity to process DNA intermediates. Exonuclease 1 (EXO1) is a pleiotropic evolutionary conserved DNA exonuclease involved in various DNA repair pathways, replication, antibody diversification, and meiosis. But, whether EXO1 facilitates these DNA metabolic processes through its enzymatic or scaffolding functions remains unclear. Here, we dissect the contribution of EXO1 enzymatic versus scaffolding activity by comparing Exo1DA/DA mice expressing a proven nuclease-dead mutant form of EXO1 to entirely EXO1-deficient Exo1-/- and EXO1 wild type Exo1+/+ mice. We show that Exo1DA/DA and Exo1-/- mice are compromised in canonical DNA repair processing, suggesting that the EXO1 enzymatic role is important for error-free DNA mismatch and double-strand break repair pathways. However, in non-canonical repair pathways, EXO1 appears to have a more nuanced function. Next-generation sequencing of heavy chain V region in B cells showed the mutation spectra of Exo1DA/DA mice to be intermediate between Exo1+/+ and Exo1-/- mice, suggesting that both catalytic and scaffolding roles of EXO1 are important for somatic hypermutation. Similarly, while overall class switch recombination in Exo1DA/DA and Exo1-/- mice was comparably defective, switch junction analysis suggests that EXO1 might fulfill an additional scaffolding function downstream of class switching. In contrast to Exo1-/- mice that are infertile, meiosis progressed normally in Exo1DA/DA and Exo1+/+ cohorts, indicating that a structural but not the nuclease function of EXO1 is critical for meiosis. However, both Exo1DA/DA and Exo1-/- mice displayed similar mortality and cancer predisposition profiles. Taken together, these data demonstrate that EXO1 has both scaffolding and enzymatic functions in distinct DNA repair processes and suggest a more composite and intricate role for EXO1 in DNA metabolic processes and disease.

Indexed as

DNA RepairDNA Repair EnzymesExodeoxyribonucleasesNeoplasmsAnimalsB-LymphocytesImmunityMeiosisMiceSomatic Hypermutation, ImmunoglobulinDNA Repair EnzymesExo1 protein, mouseExodeoxyribonucleases

Identifiers

PMID35849338
PMCPMC9371890
OpenAlexW4285800555

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.