Evidence map›Paper›PMID 35849058›Full record

ArticleHuman molecular genetics2022

Updated variant curation expert panel criteria and pathogenicity classifications for 251 variants for RYR1-related malignant hyperthermia susceptibility.

Jennifer J Johnston, Robert T Dirksen, Thierry Girard, Phil M Hopkins, Natalia Kraeva, Mungunsukh Ognoon, K Bailey Radenbaugh, Sheila Riazi, Rachel L Robinson, Louis A Saddic Iii and 8 more

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Review
  5. A proposed North American approach for genetic testing of individuals at risk for malignant hyperthermia.Canadian journal of anaesthesia = Journal canadien d'anesthesie · 2026
    Review
  6. Article
  7. Clinical and Genetic Spectrum ofMolecular syndromology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Biomolecules · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. The history and future of pharmacogenetics in Aotearoa/New Zealand.Journal of the Royal Society of New Zealand · 2025
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 10 institutions in 5 countries.

Jennifer J JohnstonCenter for Precision Health Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.ORCID 0000-0002-1012-6358
Robert T DirksenDepartment of Pharmacology and Physiology, University of Rochester Medical School, Rochester, NY 14642, USA.
Thierry GirardDepartment of Anesthesiology, University of Basel, Basel, CH-4031, Switzerland.
Phil M HopkinsMH Unit, Leeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds LS9 7TF, UK.
Natalia KraevaDepartment of Anesthesia and Pain Medicine, University Health Network, University of Toronto, Toronto, M5G 2C4, Canada.
Mungunsukh OgnoonConsortium for Health and Military Performance, Uniformed Services University Health Science, Bethesda, MD 20814, USA.
K Bailey RadenbaughCenter for Precision Health Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Sheila RiaziDepartment of Anesthesia and Pain Medicine, University Health Network, University of Toronto, Toronto, M5G 2C4, Canada.
Rachel L RobinsonNorth East & Yorkshire Genomic Laboratory Hub, St. James University Hospital, Leeds LS9 7TF, UK.
Louis A Saddic IiiDepartment of Anesthesiology, University of California Los Angeles, Los Angeles, CA 90095, USA.
Nyamkhishig SambuughinConsortium for Health and Military Performance, Uniformed Services University Health Science, Bethesda, MD 20814, USA.
Richa SaxenaDepartment of Anesthesia, Critical Care and Pain Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA.
Sarah ShepherdNorth East & Yorkshire Genomic Laboratory Hub, St. James University Hospital, Leeds LS9 7TF, UK.
Kathryn StowellSchool of Natural Sciences, Massey University, Palmerston North 4474, New Zealand.
James WeberPrevention Genetics, Marshfield, WI 54449, USA.
Seeley YooCenter for Precision Health Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Henry RosenbergMH Association of the United States, Sherburne, NY 13460, USA.
Leslie G BieseckerCenter for Precision Health Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.ORCID 0000-0002-0197-3811
National Institutes of Health · USSt James's University Hospital · GBUniformed Services University of the Health Sciences · USUniversity Health Network · CAHarvard University · USMassey University · NZUniversity of Basel · CHUniversity of California, Los Angeles · USUniversity of Leeds · GBUniversity of Rochester · US

Funding

Resource ProjectU41HG006834 · NHGRI · BRIGHAM AND WOMEN'S HOSPITAL · PI MARTIN, CHRISTA LESE, REHM, HEIDI L · 2013 to 2020
$26.9M
Genomic Ascertainment - Molecular and Genetic AspectsZIAHG200359 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE · 2009 to 2025
$19.7M
Genomic Ascertainment - Clinical and Behavioral AspectsZIAHG200387 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE · 2013 to 2025
$15.5M
Basis of Muscle Dysfunction in Malignant Hyperthermia & Central Core DiseaseR01AR053349 · NIAMS · BAYLOR COLLEGE OF MEDICINE · PI DIRKSEN, ROBERT T, HAMILTON, SUSAN L · 2006 to 2020
$8.0M
Primary Mitochondrial Disease Expert Curation PanelU24HD093483 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI FALK, MARNI J, GAI, XIAOWU · 2017 to 2023
$2.2M
NHGRI NIH HHS U41 HG006834NIAMS NIH HHS R01 AR053349NICHD NIH HHS U24 HD093483
6 · The paper itself

Abstract

The ClinGen malignant hyperthermia susceptibility (MHS) variant curation expert panel specified the American College of Medical Genetics and Genomics/Association of Molecular Pathologists (ACMG/AMP) criteria for RYR1-related MHS and a pilot analysis of 84 variants was published. We have now classified an additional 251 variants for RYR1-related MHS according to current ClinGen standards and updated the criteria where necessary. Criterion PS4 was modified such that individuals with multiple RYR1 variants classified as pathogenic (P), likely pathogenic (LP), or variant of uncertain significance (VUS) were not considered as providing evidence for pathogenicity. Criteria PS1 and PM5 were revised to consider LP variants at the same amino-acid residue as providing evidence for pathogenicity at reduced strength. Finally, PM1 was revised such that if PS1 or PM5 are used PM1, if applicable, should be downgraded to supporting. Of the 251 RYR1 variants, 42 were classified as P/LP, 16 as B/LB, and 193 as VUS. The primary driver of 175 VUS classifications was insufficient evidence supporting pathogenicity, rather than evidence against pathogenicity. Functional data supporting PS3/BS3 was identified for only 13 variants. Based on the posterior probabilities of pathogenicity and variant frequencies in gnomAD, we estimated the prevalence of individuals with RYR1-related MHS pathogenic variants to be between 1/300 and 1/1075, considerably higher than current estimates. We have updated ACMG/AMP criteria for RYR1-related MHS and classified 251 variants. We suggest that prioritization of functional studies is needed to resolve the large number of VUS classifications and allow for appropriate risk assessment. RYR1-related MHS pathogenic variants are likely to be more common than currently appreciated.

Indexed as

Malignant HyperthermiaGenetic TestingGenetic VariationHumansRyanodine Receptor Calcium Release ChannelUnited StatesVirulenceRyanodine Receptor Calcium Release Channel

Identifiers

PMID35849058
PMCPMC9703808
OpenAlexW4285804291

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.