Evidence map›Paper›PMID 35846129›Full record

ArticleFrontiers in genetics2022

DILI

Sanjay Rathee, Meabh MacMahon, Anika Liu, Nicholas M Katritsis, Gehad Youssef, Woochang Hwang, Lilly Wollman, Namshik Han

Abstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sanjay RatheeMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Meabh MacMahonMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Anika LiuMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Nicholas M KatritsisMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Gehad YoussefMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Woochang HwangMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Lilly WollmanMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.
Namshik HanMilner Therapeutics Institute, University of Cambridge, Cambridge, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drug-induced liver injury (DILI) is a class of adverse drug reactions (ADR) that causes problems in both clinical and research settings. It is the most frequent cause of acute liver failure in the majority of Western countries and is a major cause of attrition of novel drug candidates. Manual trawling of the literature is the main route of deriving information on DILI from research studies. This makes it an inefficient process prone to human error. Therefore, an automatized AI model capable of retrieving DILI-related articles from the huge ocean of literature could be invaluable for the drug discovery community. In this study, we built an artificial intelligence (AI) model combining the power of natural language processing (NLP) and machine learning (ML) to address this problem. This model uses NLP to filter out meaningless text (e.g., stop words) and uses customized functions to extract relevant keywords such as singleton, pair, and triplet. These keywords are processed by an apriori pattern mining algorithm to extract relevant patterns which are used to estimate initial weightings for a ML classifier. Along with pattern importance and frequency, an FDA-approved drug list mentioning DILI adds extra confidence in classification. The combined power of these methods builds a DILI classifier (DILI

Indexed as

artificial intelligence (AI)drug-induced liver injury (DILI)machine learning (ML)natural language processing (NLP)pattern miningshiny app

Identifiers

PMID35846129
PMCPMC9277181

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.