Evidence map›Paper›PMID 35842672›Full record

ArticleBMC research notes2022

Characterization of polymorphic microsatellite markers for the Japanese endangered land snail Mandarina.

Shu Nishida, Kotaro Mimura, Hideaki Mori, Satoshi Chiba

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shu NishidaGraduate School of Life Sciences, Tohoku University, 6-3 Aramaki aza aoba, Aoba-ku, Sendai, Miyagi, 980-8578, Japan. shunishi2424@gmail.com.ORCID http://orcid.org/0000-0002-1984-7434
Kotaro MimuraGraduate School of Life Sciences, Tohoku University, 6-3 Aramaki aza aoba, Aoba-ku, Sendai, Miyagi, 980-8578, Japan.
Hideaki MoriJapan Wildlife Research Center, Kotobashi 3-3-7 Sumida-ku Tokyo, Tokyo, 130-8606, Japan.
Satoshi ChibaGraduate School of Life Sciences, Tohoku University, 6-3 Aramaki aza aoba, Aoba-ku, Sendai, Miyagi, 980-8578, Japan.
Tohoku University · JPJapan Wildlife Research Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveMandarina is an endangered land snail genus of the oceanic Ogasawara archipelago. On Chichijima Island, the largest inhabited island in Ogasawara, this genus is almost extinct in the wild due to predation by invasive species. Although ex situ conservation programs started in 2010, genetic diversity and population structure remain unclear due to a lack of genetic markers with sufficient genetic variation. In this study, we designed polymorphic microsatellite markers of Mandarina to enable genetic analysis and to develop appropriate conservation plans.

resultsTwenty-three polymorphic microsatellite markers were identified from the genomic DNA of wild samples of Mandarina mandarina. We assessed the genetic diversity of each marker. In 16 markers, neither linkage disequilibrium nor deviation from Hardy-Weinberg equilibrium was detected. These 16 markers were tested for multiplex PCR using low-density DNA extracted non-lethally from captive samples of M. mandarina, M. chichijimana and M. suenoae. Of the 16 markers, 15, 12 and 9 were usable for multiplex PCR, respectively. Genetic analysis using these microsatellite loci will be an important resource for the conservation of Mandarina.

Indexed as

Genetic VariationMicrosatellite RepeatsAnimalsEndangered SpeciesJapanLinkage DisequilibriumSnailsEndangered speciesMandarinaMandarina mandarinaNuclear microsatelliteOceanic land snailsOgasawara islands

Identifiers

PMID35842672
PMCPMC9288687
OpenAlexW4285588264

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.