Evidence map›Paper›PMID 35841650›Full record

ReviewCurrent opinion in plant biology2022

Linking transcriptional silencing with chromatin remodeling, folding, and positioning in the nucleus.

Zhang-Wei Liu, Carl H Simmons, Xuehua Zhong

Open access · greenAbstract readReview
In one paragraph

Review in Current opinion in plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Zhang-Wei LiuLaboratory of Genetics & Wisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI 53706, USA.
Carl H SimmonsLaboratory of Genetics & Wisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI 53706, USA.
Xuehua ZhongLaboratory of Genetics & Wisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: xuehua.zhong@wisc.edu.
University of Wisconsin–Madison · USWisconsin Institutes for Discovery · US

Funding

Uncovering the epigenetic codes for genome integrity, developmental and environmental interaction.R35GM124806 · NIGMS · WASHINGTON UNIVERSITY · PI XUEHUA ZHONG · 2017 to 2026
$4.2M
NIGMS NIH HHS R35 GM124806
6 · The paper itself

Abstract

Chromatin organization is important for many DNA-templated processes in eukaryotic cells such as replication and transcription. Recent studies have uncovered the capacity of epigenetic modifications, phase separation, and nuclear architecture and spatial positioning to regulate chromatin organization in both plants and animals. Here, we provide an overview of the recent progress made in understanding how chromatin is organized within the nucleus at both the local and global levels with respect to the regulation of transcriptional silencing in plants. To be concise while covering important mechanisms across a range of scales, we focus on how epigenetic modifications and chromatin remodelers alter local chromatin structure, how liquid-liquid phase separation physically separates broader chromatin domains into distinct droplets, and how nuclear positioning affects global chromatin organization.

Indexed as

Cell NucleusChromatin Assembly and DisassemblyAnimalsChromatinChromosomesDNAPlantsChromatinDNAChromatin organizationEpigenetic modificationsTranscriptional regulation

Identifiers

PMID35841650
PMCPMC10014033
OpenAlexW4285384251

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.